Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1539 ATGGAGATTCTGAGAAGAAGGGTCGACGGCAGTGTGCTTCTGGTGGCGGCCGCTCTGGTGGTACTGCTGGCGGTGGTGCCGGAAGTATCAGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACCAATGTGAACTACACTATCTGGGCTCAGGGAAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCAATTCTGATCATCCACTCCACAATTTCACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTCACCCTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTGGCCACACCCCATTCGTTTTAACCGCTGTTTTCGCCATTGCTGCTCTGTACGAAGCTTTCGCCCAGGTCTGGTAG 537 50.65 MEILRRRVDGSVLLVAAALVVLLAVVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLPPPPSASPLNEKSSALRSTYIGHTPFVLTAVFAIAALYEAFAQVW 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28620443 28621785 + CcPI632755_10g015390.1 Cco10g1539 190497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g1539 178 Pfam Plastocyanin-like domain 42 124 IPR003245 GO:0009055(InterPro)
Cco10g1539 178 ProSiteProfiles Phytocyanin domain profile. 32 132 IPR003245 GO:0009055(InterPro)
Cco10g1539 178 SUPERFAMILY Cupredoxins 31 130 IPR008972 -
Cco10g1539 178 FunFam Lamin-like protein 30 133 - -
Cco10g1539 178 PANTHER BLUE COPPER PROTEIN 21 135 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cco10g1539 178 Gene3D - 30 133 IPR008972 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1539 - - - 0.0