Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco10g1643 | ATGTCTTCTGGGGCTCGATTGCTTGTCTTGGATTTTGCCCTCTCTTTTATGTGGTTATGGTCGGGGGTTCTCGTTAAGATCTTTGTTTTTGGGATATTGGGGTTCGGAAATGATCTGATTACTGAGGTTGTCAAGGCTGTCGTTTCGATTCTCAACATGTTTTTTTTTGCGTTCTTGGTGAAAATTTCAAAAGGGGCTGCTTATAATCCTCTTAGCATCTTGTCTGCTGCTTTTTCTGGGGATTTCAGCAGCTTTCTCTTCACTGTTGGTGCCAGAATCCCTGCTCAGGTAATGGGAGCTATTACCGCTGTTAGGCTGATTATCCATACATTTCCCGAAGCAGGACGAGGGCCTCGTTTAAACGTTGGCATCCATCATGGAGCTTTGACAGAAGGATTGTTAACGTTCGCCATTGTATTTATCTCACTTGGACTTTCAAGGAAAATCGATGGAAATTTCTTCATGAAGACTTGGATCTCAAGTTTATCCAAGTTAGCTCTTCATATTCTCGGTTCCGACTTAACTGGTGGCTGTATGAACCCTGCATCTGTAATGGGATGGGCGTATGCTCGTGGGGAACATATAACGATCGAACATATTCTTGTATACTGGATCGCTCCAATTCAAGGAACTATAGTAGCAGTATTGACGTTTAAGTTACTATTTCGACAATCGAAAGAGGAGAAAGTAAATATGAAGAAGAAATCAGAATAG | 714 | 41.88 | MSSGARLLVLDFALSFMWLWSGVLVKIFVFGILGFGNDLITEVVKAVVSILNMFFFAFLVKISKGAAYNPLSILSAAFSGDFSSFLFTVGARIPAQVMGAITAVRLIIHTFPEAGRGPRLNVGIHHGALTEGLLTFAIVFISLGLSRKIDGNFFMKTWISSLSKLALHILGSDLTGGCMNPASVMGWAYARGEHITIEHILVYWIAPIQGTIVAVLTFKLLFRQSKEEKVNMKKKSE | 237 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 29846725 | 29850399 | - | CcPI632755_10g016430.1 | Cco10g1643 | 190601 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco10g1643 | 237 | PRINTS | Major intrinsic protein family signature | 161 | 183 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cco10g1643 | 237 | PRINTS | Major intrinsic protein family signature | 201 | 221 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cco10g1643 | 237 | PRINTS | Major intrinsic protein family signature | 88 | 107 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cco10g1643 | 237 | PRINTS | Major intrinsic protein family signature | 6 | 25 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cco10g1643 | 237 | PRINTS | Major intrinsic protein family signature | 130 | 148 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cco10g1643 | 237 | PANTHER | AQUAPORIN SIP2-1-RELATED | 3 | 237 | IPR044226 | GO:0015267(InterPro) | |
Cco10g1643 | 237 | Gene3D | Glycerol uptake facilitator protein. | 3 | 237 | IPR023271 | - | |
Cco10g1643 | 237 | Pfam | Major intrinsic protein | 45 | 217 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cco10g1643 | 237 | SUPERFAMILY | Aquaporin-like | 6 | 235 | IPR023271 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco10g1643 | K09875 | - | csv:101214379 | 429.483 |