Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco10g1651 | ATGGAGGTTTTACAGGCCCTCGATTCTCAGGTTCTCATCGGTTTAGCAGCCGCCCTGATTGCCATTGTTGCTGGTGCTGTTTTCCTCTTTTCCTCCAGAAAACCCGCATCCAGAGCCTGCTTGGATCCTGAGAAGTTTAAGGAGTTTAAGCTTGTTAAGCGTACTAAGCTGAGCCACAATGTGGCGAAGTTCACTTTTATACTTCCCAAGCCCGATTCAATTCTTGGTCTTCCTATTGGACAACATTTAAGTTGCAGGGGGAAGGATGGCCAAGGTGAAGAAGTTATTAAATCTTACACCCCAACTACTTTGGATACTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGCAGGATGTCACATCATTTTCGAGAAATGCGCATTGGGGACTATCTTGCTGTAAAGGGACCAAAGGGACGTTTCAAGTACCAACCTGGTCAAGTTCATGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTGCTCGGGCTATATTAGAGAACCCAAATGACAAAACAAAGGTTCACCTTATTTATGCCAATGTTACACTAGAAGATATTCTATTGAAGGAGGAATTGGATCTTCTTGCCAAAAGATACCCTGATCGCTTCAAAATCTACTATGTGTTGAACCAGCCTCCTGAAGTTTGGGATGGCGGCGTTGGCTTTGTGTCCAAGGAAATGATCAAAGCACATTGTCCTGCACCAGCCGCTGACATTAAGATTTTACGGTGCGGTCCACCCCCGATGAACAAGGCCATGGGTGACCACCTTGATGCTCTTGGATATTCAGCTGAAATGCAGTTTCAATTCTAA | 843 | 44.72 | MEVLQALDSQVLIGLAAALIAIVAGAVFLFSSRKPASRACLDPEKFKEFKLVKRTKLSHNVAKFTFILPKPDSILGLPIGQHLSCRGKDGQGEEVIKSYTPTTLDTDVGYFELVIKMYPQGRMSHHFREMRIGDYLAVKGPKGRFKYQPGQVHAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTLEDILLKEELDLLAKRYPDRFKIYYVLNQPPEVWDGGVGFVSKEMIKAHCPAPAADIKILRCGPPPMNKAMGDHLDALGYSAEMQFQF | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 29930603 | 29934939 | + | CcPI632755_10g016510.1 | Cco10g1651 | 190609 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco10g1651 | 280 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 19 | 280 | IPR001834 | GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER) | |
Cco10g1651 | 280 | SUPERFAMILY | Riboflavin synthase domain-like | 41 | 149 | IPR017938 | - | |
Cco10g1651 | 280 | Pfam | Oxidoreductase NAD-binding domain | 157 | 263 | IPR001433 | GO:0016491(InterPro) | |
Cco10g1651 | 280 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 44 | 148 | IPR017927 | GO:0016491(InterPro) | |
Cco10g1651 | 280 | FunFam | NADH-cytochrome b5 reductase | 39 | 138 | - | - | |
Cco10g1651 | 280 | FunFam | NADH-cytochrome b5 reductase | 138 | 280 | - | - | |
Cco10g1651 | 280 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 194 | 205 | IPR001709 | GO:0016491(InterPro) | |
Cco10g1651 | 280 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 156 | 175 | IPR001709 | GO:0016491(InterPro) | |
Cco10g1651 | 280 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 250 | 258 | IPR001709 | GO:0016491(InterPro) | |
Cco10g1651 | 280 | PRINTS | Cytochrome B5 reductase signature | 250 | 258 | - | - | |
Cco10g1651 | 280 | PRINTS | Cytochrome B5 reductase signature | 194 | 205 | - | - | |
Cco10g1651 | 280 | PRINTS | Cytochrome B5 reductase signature | 97 | 104 | - | - | |
Cco10g1651 | 280 | PRINTS | Cytochrome B5 reductase signature | 133 | 147 | - | - | |
Cco10g1651 | 280 | PRINTS | Cytochrome B5 reductase signature | 156 | 175 | - | - | |
Cco10g1651 | 280 | PRINTS | Cytochrome B5 reductase signature | 75 | 86 | - | - | |
Cco10g1651 | 280 | CDD | cyt_b5_reduct_like | 49 | 280 | - | - | |
Cco10g1651 | 280 | Pfam | Oxidoreductase FAD-binding domain | 49 | 147 | IPR008333 | - | |
Cco10g1651 | 280 | Gene3D | Translation factors | 36 | 138 | - | - | |
Cco10g1651 | 280 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 136 | 275 | IPR039261 | - | |
Cco10g1651 | 280 | Gene3D | - | 139 | 280 | IPR039261 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g0671 | Cco-Chr4:21158968 | Cco10g1651 | Cco-Chr10:29930603 | 2.90E-134 | dispersed | |
Cco10g1651 | Cco-Chr10:29930603 | Cco11g0308 | Cco-Chr11:3102073 | 3.60E-52 | dispersed | |
Cco10g1651 | Cco-Chr10:29930603 | Cco03g0942 | Cco-Chr3:12089539 | 1.20E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco10g1651 | K00326 | - | csv:101212931 | 528.48 |