Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco10g1713 | ATGGCTCATCCAGACTACCTTCTTCTTCTCTCTCTCTTGTTGACCTCCTTTCTCTTCGTTCAAGTCATTTTCACTCGAACCCGACCCGACAGGCTTCGTCGTCCACCGAGCCCTCCGTCGTGGCCAGTGATCGGCCACCTCCACCTCCTTGGTAAAATCCCTCACCAAGCCTTTCACAAGCTGTCATGTCAATATGGACCATTAATGCATCTCTTCTTGGGCTCTAAGCCTTGTGTTATTGTCTCCAATTCAGAAATGGCTAAACAATTCCTCAAAACTAATGAATCCTCCTTTCTTAACCGACCCATTAGGCTCAACATAAACTATCTCACTTATGGCTCTGCGGACTTCACTTTTGCACCCTATGGACCCTATTGGAAGTTCTTGAAAAAGCTTTGCATGACAGAGCTCCTCGGTGGTCGGACCCTCGACCTCCACCGCCCGATAAGGGACGAGGAAATGAGGTTGTTTGTGCAAAGGATTCATGAACAGGCTATTGTAGGGAAGATGGTTGATGTTGGAGTTGAGCTTTCAAGGTTAATGAACAACATAATATCGAGGATGGCACTAAGGAGACGATGCTCAGAGAAGGAAGATGGATCAGAAGAGGTCGGGAAGCTGGTGGGGGAGATGTGCGAGCTGGCTGGAGAACTTAACATTGCCGATATGATTTGGTTCTGCAAGGGATTGGATCTACAAGGGTTTCGAAGACGAGTTAAAGATGTGAGAAACAGGTATGATATAATGATGGAAAATATATTAAAGGAGCATGAACAACACGGGAAGAAGAAGAAAGATGATGGAGTTAAGGATTTTCTTGATGTCTTACTTCACATTTACGAAGATAAAACCTCACAAATCAAACTCACAAGAGAGAATATTAAGGCTTTTATTATGAACATATTCGGCGCCGGAACTGAAACATCAGCCGCGGCGACAGAGTGGGCATTAGCGGAGCTAATTAACAACCCATCCGCCATGGCCAAAGCAACTCAAGAACTCGACTCCATCACCGGAAAAACCCGTCTCCTTCACGAGTCCGATCTCCCCAATCTCCCCTATCTCCAAGCCGTCGTCAAAGAGACTCTCCGTCTCCACCCGACGGCGCCGCTTATAGTCCGGGAGGCCACCGAGTCCTGCACCGTCGCCGGCTACCACATTCCAGCCAAGACCCGCCTGCTCGTCAACGTCTGGTCCATAGCCCGCGACCCGACCCACTGGCCCGATCCAAGCCGGTTCGACCCGGGTCGGTTCTTGAACCACCCACCCGGTTCCGACCTGCAGAGCTTTGATCTTATGCCGTTTGGAAGTGGTCGCCGGAGCTGCCCCGGCGCCGCCCTGGCGCTGGTGGCGGTGCCGGCGGTTCTCGGGAGGTTAATTCAGTGCTTTGAGTGGAGGGTTGACAGCCGCAGAGGCATTGATATGGAAGAAGGGCCGGGAATCTCTCTCCGGCGAGCTCATCCGTTGGTTCTAGTACCAGTGCCTAGGCTTCATCCTTTTCCTTCTATTTAA | 1512 | 50.66 | MAHPDYLLLLSLLLTSFLFVQVIFTRTRPDRLRRPPSPPSWPVIGHLHLLGKIPHQAFHKLSCQYGPLMHLFLGSKPCVIVSNSEMAKQFLKTNESSFLNRPIRLNINYLTYGSADFTFAPYGPYWKFLKKLCMTELLGGRTLDLHRPIRDEEMRLFVQRIHEQAIVGKMVDVGVELSRLMNNIISRMALRRRCSEKEDGSEEVGKLVGEMCELAGELNIADMIWFCKGLDLQGFRRRVKDVRNRYDIMMENILKEHEQHGKKKKDDGVKDFLDVLLHIYEDKTSQIKLTRENIKAFIMNIFGAGTETSAAATEWALAELINNPSAMAKATQELDSITGKTRLLHESDLPNLPYLQAVVKETLRLHPTAPLIVREATESCTVAGYHIPAKTRLLVNVWSIARDPTHWPDPSRFDPGRFLNHPPGSDLQSFDLMPFGSGRRSCPGAALALVAVPAVLGRLIQCFEWRVDSRRGIDMEEGPGISLRRAHPLVLVPVPRLHPFPSI | 503 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 30670945 | 30673910 | - | CcPI632755_10g017130.1 | Cco10g1713 | 190671 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco10g1713 | 503 | FunFam | Cytochrome P450 family protein | 26 | 491 | - | - | |
| Cco10g1713 | 503 | Gene3D | Cytochrome P450 | 20 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 396 | 420 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | SUPERFAMILY | Cytochrome P450 | 35 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 14 | 496 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cco10g1713 | 503 | CDD | CYP93 | 66 | 493 | - | - | |
| Cco10g1713 | 503 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | P450 superfamily signature | 442 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | Pfam | Cytochrome P450 | 35 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1713 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco04g0102 | Cco-Chr4:2037976 | Cco10g1713 | Cco-Chr10:30670945 | 8.10E-167 | dispersed | |
| Cco08g1815 | Cco-Chr8:29216257 | Cco10g1713 | Cco-Chr10:30670945 | 1.10E-81 | dispersed | |
| Cco10g1713 | Cco-Chr10:30670945 | Cco11g0030 | Cco-Chr11:380718 | 6.00E-90 | dispersed | |
| Cco10g1713 | Cco-Chr10:30670945 | Cco10g1714 | Cco-Chr10:30678544 | 4.30E-104 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco10g1713 | K24188 | - | csv:101205411 | 783.867 |