Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1713 ATGGCTCATCCAGACTACCTTCTTCTTCTCTCTCTCTTGTTGACCTCCTTTCTCTTCGTTCAAGTCATTTTCACTCGAACCCGACCCGACAGGCTTCGTCGTCCACCGAGCCCTCCGTCGTGGCCAGTGATCGGCCACCTCCACCTCCTTGGTAAAATCCCTCACCAAGCCTTTCACAAGCTGTCATGTCAATATGGACCATTAATGCATCTCTTCTTGGGCTCTAAGCCTTGTGTTATTGTCTCCAATTCAGAAATGGCTAAACAATTCCTCAAAACTAATGAATCCTCCTTTCTTAACCGACCCATTAGGCTCAACATAAACTATCTCACTTATGGCTCTGCGGACTTCACTTTTGCACCCTATGGACCCTATTGGAAGTTCTTGAAAAAGCTTTGCATGACAGAGCTCCTCGGTGGTCGGACCCTCGACCTCCACCGCCCGATAAGGGACGAGGAAATGAGGTTGTTTGTGCAAAGGATTCATGAACAGGCTATTGTAGGGAAGATGGTTGATGTTGGAGTTGAGCTTTCAAGGTTAATGAACAACATAATATCGAGGATGGCACTAAGGAGACGATGCTCAGAGAAGGAAGATGGATCAGAAGAGGTCGGGAAGCTGGTGGGGGAGATGTGCGAGCTGGCTGGAGAACTTAACATTGCCGATATGATTTGGTTCTGCAAGGGATTGGATCTACAAGGGTTTCGAAGACGAGTTAAAGATGTGAGAAACAGGTATGATATAATGATGGAAAATATATTAAAGGAGCATGAACAACACGGGAAGAAGAAGAAAGATGATGGAGTTAAGGATTTTCTTGATGTCTTACTTCACATTTACGAAGATAAAACCTCACAAATCAAACTCACAAGAGAGAATATTAAGGCTTTTATTATGAACATATTCGGCGCCGGAACTGAAACATCAGCCGCGGCGACAGAGTGGGCATTAGCGGAGCTAATTAACAACCCATCCGCCATGGCCAAAGCAACTCAAGAACTCGACTCCATCACCGGAAAAACCCGTCTCCTTCACGAGTCCGATCTCCCCAATCTCCCCTATCTCCAAGCCGTCGTCAAAGAGACTCTCCGTCTCCACCCGACGGCGCCGCTTATAGTCCGGGAGGCCACCGAGTCCTGCACCGTCGCCGGCTACCACATTCCAGCCAAGACCCGCCTGCTCGTCAACGTCTGGTCCATAGCCCGCGACCCGACCCACTGGCCCGATCCAAGCCGGTTCGACCCGGGTCGGTTCTTGAACCACCCACCCGGTTCCGACCTGCAGAGCTTTGATCTTATGCCGTTTGGAAGTGGTCGCCGGAGCTGCCCCGGCGCCGCCCTGGCGCTGGTGGCGGTGCCGGCGGTTCTCGGGAGGTTAATTCAGTGCTTTGAGTGGAGGGTTGACAGCCGCAGAGGCATTGATATGGAAGAAGGGCCGGGAATCTCTCTCCGGCGAGCTCATCCGTTGGTTCTAGTACCAGTGCCTAGGCTTCATCCTTTTCCTTCTATTTAA 1512 50.66 MAHPDYLLLLSLLLTSFLFVQVIFTRTRPDRLRRPPSPPSWPVIGHLHLLGKIPHQAFHKLSCQYGPLMHLFLGSKPCVIVSNSEMAKQFLKTNESSFLNRPIRLNINYLTYGSADFTFAPYGPYWKFLKKLCMTELLGGRTLDLHRPIRDEEMRLFVQRIHEQAIVGKMVDVGVELSRLMNNIISRMALRRRCSEKEDGSEEVGKLVGEMCELAGELNIADMIWFCKGLDLQGFRRRVKDVRNRYDIMMENILKEHEQHGKKKKDDGVKDFLDVLLHIYEDKTSQIKLTRENIKAFIMNIFGAGTETSAAATEWALAELINNPSAMAKATQELDSITGKTRLLHESDLPNLPYLQAVVKETLRLHPTAPLIVREATESCTVAGYHIPAKTRLLVNVWSIARDPTHWPDPSRFDPGRFLNHPPGSDLQSFDLMPFGSGRRSCPGAALALVAVPAVLGRLIQCFEWRVDSRRGIDMEEGPGISLRRAHPLVLVPVPRLHPFPSI 503
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 30670945 30673910 - CcPI632755_10g017130.1 Cco10g1713 190671
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco10g1713 503 FunFam Cytochrome P450 family protein 26 491 - -
Cco10g1713 503 Gene3D Cytochrome P450 20 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 496 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cco10g1713 503 CDD CYP93 66 493 - -
Cco10g1713 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1713 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g0102 Cco-Chr4:2037976 Cco10g1713 Cco-Chr10:30670945 8.10E-167 dispersed
Cco08g1815 Cco-Chr8:29216257 Cco10g1713 Cco-Chr10:30670945 1.10E-81 dispersed
Cco10g1713 Cco-Chr10:30670945 Cco11g0030 Cco-Chr11:380718 6.00E-90 dispersed
Cco10g1713 Cco-Chr10:30670945 Cco10g1714 Cco-Chr10:30678544 4.30E-104 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1713 K24188 - csv:101205411 783.867