Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1734 ATGGAAATCGACTCACTGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACATACAGGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCACATTTACCTGTTTGCACTGTACTGGGATTAGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGCCTACAAGCACATGAAACTTAAACCCACCATTCTGGACGAGTATTCAAAGGAGAGATCTGCCACCCCCCTTGTTAAGCCACACAACTTTATGCACCCAGATGATCATCTAGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTATATGTTACAGTCTTGTACGAGTTGATCCCTGTTGCATTTGTTGGGCAGCCAATGTATTGGCTTGTCTTCTCATATTGGATTGTCCTTGCATTGCATGGAAAAGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGCGAAGATAAGCACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTTCTTGTTGATCATATAACAGGACATTTAGGGGACGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGATGGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGGTCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGGTCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTCGATAATTTCAGGTTTCTTGGAACATCAGGACAGAATGTAGATGATCTCGAGAAGTATTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGTTGCTACCCATTCACTGATCGGGATCCTTTCCTAATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAATTTTGATACTCGCTTAATAAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCAATTCCAAGATTTTGCGAGAAGGGGGTTGCCGTAGTGGAAACTGATTATCTAAAATTACCTGCTTCTAAGAAAGTGAAGCAATGTGGCCTCTGA 1383 43.46 MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPHLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGDVLLPSVYVTVLYELIPVAFVGQPMYWLVFSYWIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKHVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDNFDTRLIKGAEGQMVRLIAIPRFCEKGVAVVETDYLKLPASKKVKQCGL 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30900569 30906704 + CcPI632755_10g017340.1 Cco10g1734 190692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g1734 460 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 7 442 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
Cco10g1734 460 Gene3D - 40 186 - -
Cco10g1734 460 Gene3D - 191 450 - -
Cco10g1734 460 Pfam DNA polymerase alpha/epsilon subunit B 204 414 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Cco10g1734 460 Pfam DNA polymerase delta subunit OB-fold domain 34 140 IPR040663 -
Cco10g1734 460 CDD MPP_PolD2_C 218 442 IPR041863 -
Cco10g1734 460 FunFam DNA polymerase delta small subunit 191 452 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1734 K02328 - csv:101221438 803.512