Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1902 ATGGAAATTTTCTTTCTTCTTCACCCAACTGTTTTCCTTTTATTTTTCCTTTTATTTTTCCTTCTATTTCTCTCTATAATCATCTTCCTATTGAAGCCTAAATTTCTGTGCCACTGTGAAATTTGCCAAGCGTATTTGTCCTCATCTTGGTCCAAAGATTTCTTTAACCTCTGTGATTGGTATTCCCATCTTCTCCGGCAGTCTCCGACGAAGACCATTCACATCCACGTTCTGAAGAACACGATTACGGCGAATCCCGACAACGTGGAATACATTCTCAAGACGAAATTTGAAAATTACCCAAAAGGGAAAATCTTCTCCTCGATTCTTGGCGATTTTTTGGGCCGTGGGATTTTCAATGTCGATGGGGATTTGTGGAGGTTTCAGAAGAAAATGGCGATCCTCGAACTTGGTCAACAGTCGATTAGATCTTACTGTTTTGAAATTGTTTCTCAGGAGATTCATTCCCGGCTTTTGCCGCTTCTTTCGTCGGTTGCCGACGGCGGAGTTTTGGATTTGCAGGATGTGTTTAGGAGATTTGCTTTTGATAGTATTTGTAAGTTTTCATTTGGGTTGGATCCAATGTGCTTGGAGCTGTCTCTTCCGATGTCCGAATTTGCCGTCGCTTTCGATCTTGCTTCTAAGCTTTCTGCTGAAAGAGCCATGGCGGTCCCGCCGTTGATCTGGAAAATCAAGCGAATGCTCAACTTAGGGAGTGAGAGAGAATTGAAAAAAGGAATAAAACTAATAAACATGTTGGCTCATGAAGTAATTCGACAGAGAAGAAAAATGGGATTCTCAACCCATAGGGACCTCCTTTCTCAATTCATGCGAACCGTGTCTGACGAAACTTTCTTACGAGATATTGTTGTGAGCTTTGTTTTAGCCGGTCGCGATACCATTGCCTCAGCCCTTACTAGCTTCTTCTGGGTTCTTTCCAATCATCCTACCGTAGAGTATGCTATCCAACTTGAGGCAGACCGAATCATGGGTCCCAACTCAAACCCTACATCCTTCGACCAAATACGAAACCTCCACTACTTACAAGCCGCTATTTTTGAGTCCATGAGGCTCTATCCTCCCATTCAGTTTGACTCCAAGTTTTGCCAGAATGACGATGTTTTACCCGATGGAACTTTTGTTGGACGTGGTACTCGAGTTACTTACCATCCCTATGCTATGGGTCGAGTTGAGCAAAATTGGGGTCCAAATTGCCTCGAGTTCAAACCCGAACGGTGGCTGAAAAACGACATATTCTGCCCCGAGAACCCTTTCAAGTACCCAATTTTTCAAGGTGGTTTTCGGTTTTGTTTAGGCAAAGAAATGGCTCTTGCTGAATTGAAAATTGTAGCACTTTCCCTTATTCGTCATTTTCAAATCCAGTCCACGACACCAGGTGTCACACCACGATTCTCCCCTGGCCTCACTGCAACCTTTTGTGGTGGATTCCAAGTTTCCATTGGTAAGAAGAAGAAATCGAATTGA 1485 43.23 MEIFFLLHPTVFLLFFLLFFLLFLSIIIFLLKPKFLCHCEICQAYLSSSWSKDFFNLCDWYSHLLRQSPTKTIHIHVLKNTITANPDNVEYILKTKFENYPKGKIFSSILGDFLGRGIFNVDGDLWRFQKKMAILELGQQSIRSYCFEIVSQEIHSRLLPLLSSVADGGVLDLQDVFRRFAFDSICKFSFGLDPMCLELSLPMSEFAVAFDLASKLSAERAMAVPPLIWKIKRMLNLGSERELKKGIKLINMLAHEVIRQRRKMGFSTHRDLLSQFMRTVSDETFLRDIVVSFVLAGRDTIASALTSFFWVLSNHPTVEYAIQLEADRIMGPNSNPTSFDQIRNLHYLQAAIFESMRLYPPIQFDSKFCQNDDVLPDGTFVGRGTRVTYHPYAMGRVEQNWGPNCLEFKPERWLKNDIFCPENPFKYPIFQGGFRFCLGKEMALAELKIVALSLIRHFQIQSTTPGVTPRFSPGLTATFCGGFQVSIGKKKKSN 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32577676 32580319 + CcPI632755_10g019020.1 Cco10g1902 190860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g1902 494 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 PANTHER CYTOCHROME P450 27 471 - -
Cco10g1902 494 Pfam Cytochrome P450 79 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 SUPERFAMILY Cytochrome P450 56 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 Gene3D Cytochrome P450 50 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1902 494 CDD CYP86A 69 472 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g1369 Cco-Chr1:24052890 Cco10g1902 Cco-Chr10:32577676 4.80E-177 dispersed
Cco10g1628 Cco-Chr10:29649113 Cco10g1902 Cco-Chr10:32577676 2.60E-109 dispersed
Cco10g1902 Cco-Chr10:32577676 Cco11g0907 Cco-Chr11:12415077 1.40E-75 dispersed
Cco10g1902 Cco-Chr10:32577676 Cco09g0436 Cco-Chr9:3891241 1.80E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1902 K20624 - csv:101207686 872.463