Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco10g1902 | ATGGAAATTTTCTTTCTTCTTCACCCAACTGTTTTCCTTTTATTTTTCCTTTTATTTTTCCTTCTATTTCTCTCTATAATCATCTTCCTATTGAAGCCTAAATTTCTGTGCCACTGTGAAATTTGCCAAGCGTATTTGTCCTCATCTTGGTCCAAAGATTTCTTTAACCTCTGTGATTGGTATTCCCATCTTCTCCGGCAGTCTCCGACGAAGACCATTCACATCCACGTTCTGAAGAACACGATTACGGCGAATCCCGACAACGTGGAATACATTCTCAAGACGAAATTTGAAAATTACCCAAAAGGGAAAATCTTCTCCTCGATTCTTGGCGATTTTTTGGGCCGTGGGATTTTCAATGTCGATGGGGATTTGTGGAGGTTTCAGAAGAAAATGGCGATCCTCGAACTTGGTCAACAGTCGATTAGATCTTACTGTTTTGAAATTGTTTCTCAGGAGATTCATTCCCGGCTTTTGCCGCTTCTTTCGTCGGTTGCCGACGGCGGAGTTTTGGATTTGCAGGATGTGTTTAGGAGATTTGCTTTTGATAGTATTTGTAAGTTTTCATTTGGGTTGGATCCAATGTGCTTGGAGCTGTCTCTTCCGATGTCCGAATTTGCCGTCGCTTTCGATCTTGCTTCTAAGCTTTCTGCTGAAAGAGCCATGGCGGTCCCGCCGTTGATCTGGAAAATCAAGCGAATGCTCAACTTAGGGAGTGAGAGAGAATTGAAAAAAGGAATAAAACTAATAAACATGTTGGCTCATGAAGTAATTCGACAGAGAAGAAAAATGGGATTCTCAACCCATAGGGACCTCCTTTCTCAATTCATGCGAACCGTGTCTGACGAAACTTTCTTACGAGATATTGTTGTGAGCTTTGTTTTAGCCGGTCGCGATACCATTGCCTCAGCCCTTACTAGCTTCTTCTGGGTTCTTTCCAATCATCCTACCGTAGAGTATGCTATCCAACTTGAGGCAGACCGAATCATGGGTCCCAACTCAAACCCTACATCCTTCGACCAAATACGAAACCTCCACTACTTACAAGCCGCTATTTTTGAGTCCATGAGGCTCTATCCTCCCATTCAGTTTGACTCCAAGTTTTGCCAGAATGACGATGTTTTACCCGATGGAACTTTTGTTGGACGTGGTACTCGAGTTACTTACCATCCCTATGCTATGGGTCGAGTTGAGCAAAATTGGGGTCCAAATTGCCTCGAGTTCAAACCCGAACGGTGGCTGAAAAACGACATATTCTGCCCCGAGAACCCTTTCAAGTACCCAATTTTTCAAGGTGGTTTTCGGTTTTGTTTAGGCAAAGAAATGGCTCTTGCTGAATTGAAAATTGTAGCACTTTCCCTTATTCGTCATTTTCAAATCCAGTCCACGACACCAGGTGTCACACCACGATTCTCCCCTGGCCTCACTGCAACCTTTTGTGGTGGATTCCAAGTTTCCATTGGTAAGAAGAAGAAATCGAATTGA | 1485 | 43.23 | MEIFFLLHPTVFLLFFLLFFLLFLSIIIFLLKPKFLCHCEICQAYLSSSWSKDFFNLCDWYSHLLRQSPTKTIHIHVLKNTITANPDNVEYILKTKFENYPKGKIFSSILGDFLGRGIFNVDGDLWRFQKKMAILELGQQSIRSYCFEIVSQEIHSRLLPLLSSVADGGVLDLQDVFRRFAFDSICKFSFGLDPMCLELSLPMSEFAVAFDLASKLSAERAMAVPPLIWKIKRMLNLGSERELKKGIKLINMLAHEVIRQRRKMGFSTHRDLLSQFMRTVSDETFLRDIVVSFVLAGRDTIASALTSFFWVLSNHPTVEYAIQLEADRIMGPNSNPTSFDQIRNLHYLQAAIFESMRLYPPIQFDSKFCQNDDVLPDGTFVGRGTRVTYHPYAMGRVEQNWGPNCLEFKPERWLKNDIFCPENPFKYPIFQGGFRFCLGKEMALAELKIVALSLIRHFQIQSTTPGVTPRFSPGLTATFCGGFQVSIGKKKKSN | 494 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 32577676 | 32580319 | + | CcPI632755_10g019020.1 | Cco10g1902 | 190860 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco10g1902 | 494 | PRINTS | P450 superfamily signature | 350 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | PANTHER | CYTOCHROME P450 | 27 | 471 | - | - | |
Cco10g1902 | 494 | Pfam | Cytochrome P450 | 79 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | SUPERFAMILY | Cytochrome P450 | 56 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | Gene3D | Cytochrome P450 | 50 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco10g1902 | 494 | CDD | CYP86A | 69 | 472 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g1369 | Cco-Chr1:24052890 | Cco10g1902 | Cco-Chr10:32577676 | 4.80E-177 | dispersed | |
Cco10g1628 | Cco-Chr10:29649113 | Cco10g1902 | Cco-Chr10:32577676 | 2.60E-109 | dispersed | |
Cco10g1902 | Cco-Chr10:32577676 | Cco11g0907 | Cco-Chr11:12415077 | 1.40E-75 | dispersed | |
Cco10g1902 | Cco-Chr10:32577676 | Cco09g0436 | Cco-Chr9:3891241 | 1.80E-86 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco10g1902 | K20624 | - | csv:101207686 | 872.463 |