Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco10g1903 | ATGGAGCTTCAACCTCAACCACAACCACAACCATCCATTGGAACTACCTGCAAGAAAGGGAAGAAGAAACCACCGGCTCGGGAGAAGAAGGACCCGGAGAAAAGAGCTAAGAAGAAGAAACCAGGGGCTACTCCTTCAGTCCTCGAACATCAACCTACTGGTCGTTTAGATGATGGCCCCAAGGTTAAGGTTTCAGAGTTTGATCGTTGTGTTGAAAACCATTTTAGAGCCATGGATACAATTGTCGAGCTCTGTTGTGAGGCAGAGGATGGCGATGGCGGCATTGACGAAACTGACATTCAGCGCTTTTCATCATCCACAATTTTCTTGAGGGAATGGAGGTTCTACAATTATGAACCGAAAACTATCAAGTTTGCTGGCGATTTAAGAGGCCTCGAGGTTAAGGATGCTGAGATCACGATAAACTTACCACAGTTCTCTTCTGCAGCTGTTCTAAAGAATGGAGCACCGCCTGCAGCCACTACATCTCTGGACTTCCGAAACTTTGCTATGCATGTTGGTGGGCCTGTTTGGGCCTTAGATTGGTGTCCTCAAGTTCATGAAAGGACCGACTCCCTTATCAAATGTGAGTTTATTGCTGTTTCTGCTCATCCCCCTGGTTCTTCTTATCACAAGATGGGTATCCCGCTCACTGGAAGAGGTATGGTGCAAATATGGTGTTTAGTGCATGGCACTGAAAGCTATGAACCGACCAATGTAGGAGAGCCACCTTCAGACTTATCATCTCAACCAAAAAGGCCTAGAGGAAGACCACCTGGGCGCAAGAAAAATGGGGTGTCGGCTTTGCCATCTCAACCAAAGAGGCCTAGAGGAAGACCTAAAAAGAAACAAGAAGAATCCAGTGATAAGAAGGGTGACAGTTACCAACTTGTTCAGGCCTTGTCTATTGAAAACCCAGTTGGTTCATCCAACTTGCTTGAGATTGATGGTGCCCCCAAAAATTCTGAAAATTTTGCATTACTGGAAAACAGTGTTGAAAGAGAGAGGAGTACCTTACAAGAAGTTTCTACATGCAATTCTGAAGATGAAGTTCCTGCTCAGAAGAGAAGAGTGAGAAGAAAAGTTGAGCCTAGGAATCAAGTTGATGACGTGGGAGTGTTATCACTTACAGAGAATCGAGAAGATGGATCCAATGCTATCAATCTTGAGGCAAATGAGAATGTTATTGGTGAAAATTCTGGGGAAGAAAATCTAATATGTAAGAACATTTCAGAGAATGCTGTCTTAGACACTAGTTCAATTGAATTTTCTATTCCCGAGAGCGTTGCTTTGCCAAGAGTCGTACTGTGTTTAGCTCACAATGGAAAGGTAGCATGGGATTTGAAATGGAAACCAACTAATGCGTGTACTGACAATTGCAAGCACCGAATGGGCTACCTTGCTGTCTTGCTGGGCAATGGATCTCTAGAAGTCTGGGAGGTTCCTTTTCCTCATGCAGTGAAGGCCATCTATCCTAAATTCAATGGGGAGGGTACAGACCCTCGCTTTGTGAAGTTGAAGCCTGTTTTCAGATGCTCGATGTTGAGAACTGCGAATACACAGAGCATCCCTCTGACAGTGGAATGGTCACAAACACCTCCTTATGATTATCTGCTCGTTGGATGTCATGATGGAACGGTTGCATTGTGGAAGTTTTCTGCAAATAGTACCTGTGAAGATACGAGGCCTTTACTTCGTTTTAGTGCAGATACAGTTCCAATAAGAGCGGTTGCATGGGCACCAAGTGAAAGCGGTCCTGAAAGTGCAAATGTGATACTTACTGCTGGCCATGGAGGTTTAAAATTTTGGGACCTAAGAGATCCTTTCCGTCCCTTGTGGGACCTTCATCCAGCACCGAGGATCATATATAGTCTGGATTGGCTTCCTAATCCTAGATGCGTTTTTTTATCCTTTGATGATGGAACATTGAGACTTCTCAGTTTGTTAAAGGCTGCATATGATGTTCCAGTAACTGGTCAACCCTTTACAGCGATAAAACAAAAAGGGCTACACACTTACTTTTGTTCATCATATGCCATTTGGAGTATTCAAGTGTCAAGGCAGACAGGCATGGTTGCGTACTGCGGTGCTGATGGAGCTGTTGTCCGTTTCCAGCTTACTACAAAAGCAGCAGACAAAGAGAATTCACGCCATCGCACCCCACATTATGTATGCGAATACTTAACCGAGGAGGGATCAATTATTACACTCCACTCTCCAGCATCAAATATTCCATTCTCTTTGAAGAAGCTGCCCAACAAATCTGAACACCCATTGTCCATGCGAGCTATTTTATCTGATTCAATGCAGTCAAATGATGGAAATCATAAAACTGCCGCAGCTCCAGCATTGGAAACTGAATCAGCCCTTTGCTCGGATGTTGATGTCGTCGTTGAATCTGGATGCGAGGAAACACTGATGTCCATCAAGAAGAAAAACCAAACTCAATCAAAGTGCAAGAAGAAGGGAGTTGAGAACCAAGAATTTGAATGCAGCGATGAGCTTAATGATGATGCACAGACGGATGCTAATGTGGTGCCTGGTTCCGGGGATGTCTTTGAAAATCTCCCTCCCAAATCAGTTGCAATGCATAGAGTGAGATGGAACATGAACATAGGGAGTGAAAGATGGTTGTGCTACGGTGGAGCAGCTGGAGTTCTACGTTGTCAGGAGATTGTGCTGTCTGCCCTCGATATGAATTATGAGACCAGAGAAGCCATTTCAAATTGCAATAATTGTTATCGCCATCGAGCCATGGTGCCTTCATTCTTGGGGGCTAAGGCGTATGTCGTGTACATGGGAGCATTACCAAAATTGGAGAGCCATGAAGTTCTAGCAGATCATCATCATAACCTCCTTGCTAATGCTGTTGGAGATAAGGAATTGGCAAGAAAAGCCAAGATTTATAGCTATGGAAGTAGCTTCAATGGATTTGCTGCAAGGCTCTTGCCCCATGAAGCCAACAAACTAGCAAAGGAAAAAAGTGTGGTGTCGGTATTTCGGAGCAAGACGAGGAAACTGCATACAACAAGATCATGGGACTTTTTGGGGCTGTCGGAGGCGGCGAGCCGGCAGAACGCCGCCGCAGAATCCGACATAATAGTGGGATTGTTGGATTCGGGGATATGGATGGAGGGTCCAAGTTTTAAAGATGATGGCTATGGCGAAATTCCGTCTAAGTGGAAAGGCAAGTGTGTCACTGGCCACAACTTCACTGCCTGTAACAGGAAAGTGATCGGCGCGAGGTTCTTCAACCTTGAAAAAATAGACGACACCATCAACCAAAGCCCCGCCGACGAGATCGGTCACGGCTCCCACACCGCCTCCACAGTCGCCGGATCCGCCGTGTACGGCGCCAGTCTCTACGGCATCGCCGGAGGCATAGCGCGCGGCGGCGTCCCGGCGGCGAGAATCGCGATGTACAAAGTGTGCTGGATCTTAGGGTGCAGCGACATGGACCTGCTGGCCGGATTCGACGACGCAATCGCGGATGGAGTTGACATCATATCGGTGTCGATCGGCGGCGACTCGACGGAATTCTTCGAGGATCCGATCGCGATCGGGTCGTTTCACGCAATGGAGAAAGGGATATTGACGAGTTGCTCGGCCGGAAATAGCGGGCCGGATTTAAAGACGGTGGAGAACACGGCGCCGTGGATAATGACGGTGGCGGCTTCTACGATTGATAGGGATTTCAGTACCATCGTCAAATTGGGTAACAACAAGAAGTTCTCTGGAGTATCAGTGAACACATTTTCTCCAAAGAAGCAAATGTACCCTTTAATCTCCGGATCAAATGCAGCATTACCAAATCATACCTCTGTTGATCCAAGGTGGTGTGATTATGGGAGTCTCGATGAGAAACAAGTGAAAGGAAAAATAGTGTATTGTTTGGGATCAGTATACCAAGAATACACCATTTCTGAGCTTGGGGGCACAGGTGTAATTTCCAATCTTATGGGCACTACTGAAATTGCCATTACCTCTCCTATTCCTTCCACTCATCTTTCCTCTCTCAACTCTAACTATGTTAGTGCCTACATTAACTCCACCAAAAACCCTCAAGCTGTCATTTACAAAACTACCGCAAAGAAGGTTGATGCTCCCTTTTCGGCTTACTTTTCTTCTAGAGGTCCTCAAACAATAGCTCCCCCTATTCTTAAGCCGGACATTGCAGCACCTGGGATTAACATTTTAGCTGCGTTCTCAAAATTGGCTTCAATTCCGAGCGACAGACATTCCCTTTTCAACCTTCTTTCTGGCACTTCTATGGCTTGTCCCCAAGCTGCCGCCATCAAGTCCGCCCTTATCACCACCGCGCCATTAAAGATCGGAGATAATTTGGACGCGACCGGCGGCGGCGCCGGCCAAATTAATCCGACCAAAGCGGTGCATCCAGGCCGCATTTACGACCTCTCTCGCACCTCTTACCTCTCTTTTCTTTGCTCCAACAAACGCTACTCCGGCACCGCCCTTGCCATCCTCACCGGAAACACCTCTTTTAACTGCTCTGCGGTCCCGCTAGCCACCGGCTACGACGCCCTCAACTACCCTTCCATGTACGTGCCCCTCGACTACGACGCCACCTCTGTTTCCGCCGTCTTCCACCGGACAGTCACCCACGTCGGATTCGGCCCATCGACGTACAAGGCAAAGGTCAAATCGCCGGCGGGTTTGTCGGTGAGAGTGTTGCCGGAGACTCTGAAATTCGATCGGGCGTACGAAAACAATCGTTTAAGGTGGTGGTGGAAGGGGCAGCGCCCGCTGTGGGGGAGGCTCCGTTGA | 4785 | 47.38 | MELQPQPQPQPSIGTTCKKGKKKPPAREKKDPEKRAKKKKPGATPSVLEHQPTGRLDDGPKVKVSEFDRCVENHFRAMDTIVELCCEAEDGDGGIDETDIQRFSSSTIFLREWRFYNYEPKTIKFAGDLRGLEVKDAEITINLPQFSSAAVLKNGAPPAATTSLDFRNFAMHVGGPVWALDWCPQVHERTDSLIKCEFIAVSAHPPGSSYHKMGIPLTGRGMVQIWCLVHGTESYEPTNVGEPPSDLSSQPKRPRGRPPGRKKNGVSALPSQPKRPRGRPKKKQEESSDKKGDSYQLVQALSIENPVGSSNLLEIDGAPKNSENFALLENSVERERSTLQEVSTCNSEDEVPAQKRRVRRKVEPRNQVDDVGVLSLTENREDGSNAINLEANENVIGENSGEENLICKNISENAVLDTSSIEFSIPESVALPRVVLCLAHNGKVAWDLKWKPTNACTDNCKHRMGYLAVLLGNGSLEVWEVPFPHAVKAIYPKFNGEGTDPRFVKLKPVFRCSMLRTANTQSIPLTVEWSQTPPYDYLLVGCHDGTVALWKFSANSTCEDTRPLLRFSADTVPIRAVAWAPSESGPESANVILTAGHGGLKFWDLRDPFRPLWDLHPAPRIIYSLDWLPNPRCVFLSFDDGTLRLLSLLKAAYDVPVTGQPFTAIKQKGLHTYFCSSYAIWSIQVSRQTGMVAYCGADGAVVRFQLTTKAADKENSRHRTPHYVCEYLTEEGSIITLHSPASNIPFSLKKLPNKSEHPLSMRAILSDSMQSNDGNHKTAAAPALETESALCSDVDVVVESGCEETLMSIKKKNQTQSKCKKKGVENQEFECSDELNDDAQTDANVVPGSGDVFENLPPKSVAMHRVRWNMNIGSERWLCYGGAAGVLRCQEIVLSALDMNYETREAISNCNNCYRHRAMVPSFLGAKAYVVYMGALPKLESHEVLADHHHNLLANAVGDKELARKAKIYSYGSSFNGFAARLLPHEANKLAKEKSVVSVFRSKTRKLHTTRSWDFLGLSEAASRQNAAAESDIIVGLLDSGIWMEGPSFKDDGYGEIPSKWKGKCVTGHNFTACNRKVIGARFFNLEKIDDTINQSPADEIGHGSHTASTVAGSAVYGASLYGIAGGIARGGVPAARIAMYKVCWILGCSDMDLLAGFDDAIADGVDIISVSIGGDSTEFFEDPIAIGSFHAMEKGILTSCSAGNSGPDLKTVENTAPWIMTVAASTIDRDFSTIVKLGNNKKFSGVSVNTFSPKKQMYPLISGSNAALPNHTSVDPRWCDYGSLDEKQVKGKIVYCLGSVYQEYTISELGGTGVISNLMGTTEIAITSPIPSTHLSSLNSNYVSAYINSTKNPQAVIYKTTAKKVDAPFSAYFSSRGPQTIAPPILKPDIAAPGINILAAFSKLASIPSDRHSLFNLLSGTSMACPQAAAIKSALITTAPLKIGDNLDATGGGAGQINPTKAVHPGRIYDLSRTSYLSFLCSNKRYSGTALAILTGNTSFNCSAVPLATGYDALNYPSMYVPLDYDATSVSAVFHRTVTHVGFGPSTYKAKVKSPAGLSVRVLPETLKFDRAYENNRLRWWWKGQRPLWGRLR | 1594 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 32583886 | 32597708 | + | CcPI632755_10g019030.1 | Cco10g1903 | 190861 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco10g1903 | 1594 | Pfam | Subtilase family | 1031 | 1433 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco10g1903 | 1594 | SUPERFAMILY | Subtilisin-like | 1007 | 1467 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco10g1903 | 1594 | MobiDBLite | consensus disorder prediction | 26 | 44 | - | - | |
Cco10g1903 | 1594 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1012 | 1476 | - | - | |
Cco10g1903 | 1594 | CDD | PA_subtilisin_like | 1236 | 1358 | - | - | |
Cco10g1903 | 1594 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 924 | 1008 | IPR037045 | - | |
Cco10g1903 | 1594 | PANTHER | RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNIT | 21 | 893 | IPR052416 | GO:0000127(PANTHER)|GO:0006383(PANTHER) | |
Cco10g1903 | 1594 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - | |
Cco10g1903 | 1594 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 1421 | 1431 | IPR023828 | - | |
Cco10g1903 | 1594 | Pfam | Fibronectin type-III domain | 1515 | 1577 | IPR041469 | - | |
Cco10g1903 | 1594 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cco10g1903 | 1594 | Gene3D | Peptidase S8/S53 domain | 1032 | 1477 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco10g1903 | 1594 | CDD | Peptidases_S8_3 | 1006 | 1440 | IPR034197 | - | |
Cco10g1903 | 1594 | Gene3D | - | 1229 | 1364 | - | - | |
Cco10g1903 | 1594 | Gene3D | - | 375 | 742 | IPR015943 | GO:0005515(InterPro) | |
Cco10g1903 | 1594 | PRINTS | Subtilisin serine protease family (S8) signature | 1030 | 1049 | IPR015500 | - | |
Cco10g1903 | 1594 | PRINTS | Subtilisin serine protease family (S8) signature | 1099 | 1112 | IPR015500 | - | |
Cco10g1903 | 1594 | PRINTS | Subtilisin serine protease family (S8) signature | 1420 | 1436 | IPR015500 | - | |
Cco10g1903 | 1594 | SMART | WD40_4 | 511 | 551 | IPR001680 | GO:0005515(InterPro) | |
Cco10g1903 | 1594 | SMART | WD40_4 | 608 | 647 | IPR001680 | GO:0005515(InterPro) | |
Cco10g1903 | 1594 | SMART | WD40_4 | 431 | 480 | IPR001680 | GO:0005515(InterPro) | |
Cco10g1903 | 1594 | SMART | WD40_4 | 666 | 705 | IPR001680 | GO:0005515(InterPro) | |
Cco10g1903 | 1594 | SMART | WD40_4 | 560 | 604 | IPR001680 | GO:0005515(InterPro) | |
Cco10g1903 | 1594 | Gene3D | - | 1481 | 1586 | - | - | |
Cco10g1903 | 1594 | Pfam | Peptidase inhibitor I9 | 929 | 1008 | IPR010259 | - | |
Cco10g1903 | 1594 | SUPERFAMILY | WD40 repeat-like | 465 | 723 | IPR036322 | GO:0005515(InterPro) | |
Cco10g1903 | 1594 | MobiDBLite | consensus disorder prediction | 237 | 294 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco07g0709 | Cco-Chr7:12792063 | Cco10g1903 | Cco-Chr10:32583886 | 2.50E-145 | dispersed | |
Cco07g0711 | Cco-Chr7:13051037 | Cco10g1903 | Cco-Chr10:32583886 | 2.40E-143 | dispersed | |
Cco10g0399 | Cco-Chr10:4707476 | Cco10g1903 | Cco-Chr10:32583886 | 6.30E-57 | dispersed | |
Cco10g0400 | Cco-Chr10:4718153 | Cco10g1903 | Cco-Chr10:32583886 | 3.20E-98 | dispersed | |
Cco10g1903 | Cco-Chr10:32583886 | Cco11g1214 | Cco-Chr11:24120027 | 1.00E-47 | dispersed | |
Cco10g1903 | Cco-Chr10:32583886 | Cco04g1202 | Cco-Chr4:27448513 | 3.80E-199 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco10g1903 | - | - | - | 0.0 |