Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1935 ATGGTAATTGAAATTGCAGTGTTTATTTTACTATCATTTTTGTGGGGTTTATGGGTGTGGCGCCGCCGTGGAGTGACGGCCGATGAGCAGCTTCCACCGGGACCGCCTCGTTGGCCGGTGGTTGGAAACTTACTCCAACTCAGTTTTTCCGCTCACGAATCCTTCACAAAACTCGCCGCCAAGTACGGCCCAATCATGACCCTCCAACTCGGATCAATGAAAACGGTAGTCATTTCCTCAAGCACGGCGGCGCGTGAGATATTCAAAAACCACGACGCGCCGCTGTCAGGGAGAATGATTTACGAAGCAATGAAAGGGGACCACGGCACAGAAGGCTCCTTAATCACCTCCCAATACGGGCCGCACTGGCGGATGCTACGGCGGCTGGCAACGTCAGAGTTCTTTGTCACCCGCCAGCTGGAAGCCACGAAACACGTCCGCCGCCGCTGCATTGACACCATGATCCGGCATGTGGAGGAGGAAACAGAAGTTGGCGAGGGCGGCTCGTGTGGGAACGTGGCGCCGTTGGACGTGGGGAAATTCATGTTCACAATGAGCTTTAATTTAATCGGGAATTTGATATTTTCAAAAGATTTATTGGAGGCAAATTCGAAGAGGGGAAAGGAATTTTATTACCATACGAGAAAAGTGATGGAGATGGCCGGAAAGCCGAATGTGGCAGACTTTTTACCGGCGTTACGGTGGGTGGATCCGCAGGGGATTAGGAGGAAGACGCAATTTCATGTGAATAAAGCGTTTGAAATTGCTGGGGAATTTATAAAAGAGAGATTATTAATAAGGGAAAAAAGGAATATTATTATTAGTGATGAGAAAATTGAAGAAAGGAAAAAAGATTATTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGGGTTGAGGAGCCTTCTCATTTCTCTTCTTGGATCATCAACGTTATCGTCTTCGAGATGTTCACGGCGGGGACGGACACCACCACCAGTACACTAGAATGGGCAATGGCAGAGCTTCTTCACAACCCAGCGGCGCTGCAAAAACTTCAGGCGGAGCTACGAGCCACCATCCCCCCGAACGGCAACCTCGAAGAAACCCATTTCCAAAACCTCCCATATCTCGATGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCCCCGCTGCCGTTCCTCTTCCCAAGAATGGCAATGAAGCCCTGCAAAATTCTCGGCTACCGGATTCCGGCTGAAACGCAAGTCTTGGTCAACTTCTGGGCCATCGGCCGTGACCCCAAAAACTGGAAAGACCCTCTGGTTTTCTCACCGGAGAGATTCTTGGATCCTACAGGTGGCAAGGATTTCAAAGGTCAACACTTTGACTTCATTCCGTTTGGCTCCGGCCGCCGCATGTGCCCGGCGGTGCCGCTGGCGTCGAGGGTTCTTCCAATGGCTCTGGGGTCGTTGGTTCTGTCGTTTGATTGGGATCTGCCGGACGGAGTTTCGGCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACCCTTCGAAAGAAAATTCCTTTGAAGGCCATTCCGACTCCACACAAACGACGTTGTTTGGATTAG 1572 51.08 MVIEIAVFILLSFLWGLWVWRRRGVTADEQLPPGPPRWPVVGNLLQLSFSAHESFTKLAAKYGPIMTLQLGSMKTVVISSSTAAREIFKNHDAPLSGRMIYEAMKGDHGTEGSLITSQYGPHWRMLRRLATSEFFVTRQLEATKHVRRRCIDTMIRHVEEETEVGEGGSCGNVAPLDVGKFMFTMSFNLIGNLIFSKDLLEANSKRGKEFYYHTRKVMEMAGKPNVADFLPALRWVDPQGIRRKTQFHVNKAFEIAGEFIKERLLIREKRNIIISDEKIEERKKDYLDVLLEFRGDGVEEPSHFSSWIINVIVFEMFTAGTDTTTSTLEWAMAELLHNPAALQKLQAELRATIPPNGNLEETHFQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYRIPAETQVLVNFWAIGRDPKNWKDPLVFSPERFLDPTGGKDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGSLVLSFDWDLPDGVSAEEMDMSEQMGITLRKKIPLKAIPTPHKRRCLD 523
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 32920724 32925538 + CcPI632755_10g019350.1 Cco10g1935 190893
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco10g1935 523 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 518 - -
Cco10g1935 523 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco10g1935 523 FunFam Cytochrome P450 76C4 23 513 - -
Cco10g1935 523 SUPERFAMILY Cytochrome P450 32 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 CDD CYP76-like 59 514 - -
Cco10g1935 523 Gene3D Cytochrome P450 20 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g1935 523 Pfam Cytochrome P450 32 505 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g0147 Cco-Chr7:1507049 Cco10g1935 Cco-Chr10:32920724 1.70E-94 dispersed
Cco07g0148 Cco-Chr7:1517853 Cco10g1935 Cco-Chr10:32920724 1.00E-94 dispersed
Cco10g1935 Cco-Chr10:32920724 Cco11g0041 Cco-Chr11:496808 3.00E-92 dispersed
Cco10g1935 Cco-Chr10:32920724 Cco05g2865 Cco-Chr5:36271161 9.00E-81 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1935 - - - 0.0