Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco10g1935 | ATGGTAATTGAAATTGCAGTGTTTATTTTACTATCATTTTTGTGGGGTTTATGGGTGTGGCGCCGCCGTGGAGTGACGGCCGATGAGCAGCTTCCACCGGGACCGCCTCGTTGGCCGGTGGTTGGAAACTTACTCCAACTCAGTTTTTCCGCTCACGAATCCTTCACAAAACTCGCCGCCAAGTACGGCCCAATCATGACCCTCCAACTCGGATCAATGAAAACGGTAGTCATTTCCTCAAGCACGGCGGCGCGTGAGATATTCAAAAACCACGACGCGCCGCTGTCAGGGAGAATGATTTACGAAGCAATGAAAGGGGACCACGGCACAGAAGGCTCCTTAATCACCTCCCAATACGGGCCGCACTGGCGGATGCTACGGCGGCTGGCAACGTCAGAGTTCTTTGTCACCCGCCAGCTGGAAGCCACGAAACACGTCCGCCGCCGCTGCATTGACACCATGATCCGGCATGTGGAGGAGGAAACAGAAGTTGGCGAGGGCGGCTCGTGTGGGAACGTGGCGCCGTTGGACGTGGGGAAATTCATGTTCACAATGAGCTTTAATTTAATCGGGAATTTGATATTTTCAAAAGATTTATTGGAGGCAAATTCGAAGAGGGGAAAGGAATTTTATTACCATACGAGAAAAGTGATGGAGATGGCCGGAAAGCCGAATGTGGCAGACTTTTTACCGGCGTTACGGTGGGTGGATCCGCAGGGGATTAGGAGGAAGACGCAATTTCATGTGAATAAAGCGTTTGAAATTGCTGGGGAATTTATAAAAGAGAGATTATTAATAAGGGAAAAAAGGAATATTATTATTAGTGATGAGAAAATTGAAGAAAGGAAAAAAGATTATTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGGGTTGAGGAGCCTTCTCATTTCTCTTCTTGGATCATCAACGTTATCGTCTTCGAGATGTTCACGGCGGGGACGGACACCACCACCAGTACACTAGAATGGGCAATGGCAGAGCTTCTTCACAACCCAGCGGCGCTGCAAAAACTTCAGGCGGAGCTACGAGCCACCATCCCCCCGAACGGCAACCTCGAAGAAACCCATTTCCAAAACCTCCCATATCTCGATGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCCCCGCTGCCGTTCCTCTTCCCAAGAATGGCAATGAAGCCCTGCAAAATTCTCGGCTACCGGATTCCGGCTGAAACGCAAGTCTTGGTCAACTTCTGGGCCATCGGCCGTGACCCCAAAAACTGGAAAGACCCTCTGGTTTTCTCACCGGAGAGATTCTTGGATCCTACAGGTGGCAAGGATTTCAAAGGTCAACACTTTGACTTCATTCCGTTTGGCTCCGGCCGCCGCATGTGCCCGGCGGTGCCGCTGGCGTCGAGGGTTCTTCCAATGGCTCTGGGGTCGTTGGTTCTGTCGTTTGATTGGGATCTGCCGGACGGAGTTTCGGCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACCCTTCGAAAGAAAATTCCTTTGAAGGCCATTCCGACTCCACACAAACGACGTTGTTTGGATTAG | 1572 | 51.08 | MVIEIAVFILLSFLWGLWVWRRRGVTADEQLPPGPPRWPVVGNLLQLSFSAHESFTKLAAKYGPIMTLQLGSMKTVVISSSTAAREIFKNHDAPLSGRMIYEAMKGDHGTEGSLITSQYGPHWRMLRRLATSEFFVTRQLEATKHVRRRCIDTMIRHVEEETEVGEGGSCGNVAPLDVGKFMFTMSFNLIGNLIFSKDLLEANSKRGKEFYYHTRKVMEMAGKPNVADFLPALRWVDPQGIRRKTQFHVNKAFEIAGEFIKERLLIREKRNIIISDEKIEERKKDYLDVLLEFRGDGVEEPSHFSSWIINVIVFEMFTAGTDTTTSTLEWAMAELLHNPAALQKLQAELRATIPPNGNLEETHFQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYRIPAETQVLVNFWAIGRDPKNWKDPLVFSPERFLDPTGGKDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGSLVLSFDWDLPDGVSAEEMDMSEQMGITLRKKIPLKAIPTPHKRRCLD | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 32920724 | 32925538 | + | CcPI632755_10g019350.1 | Cco10g1935 | 190893 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco10g1935 | 523 | PRINTS | P450 superfamily signature | 319 | 336 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | P450 superfamily signature | 372 | 383 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 6 | 518 | - | - | |
| Cco10g1935 | 523 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | E-class P450 group I signature | 328 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | E-class P450 group I signature | 308 | 325 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | E-class P450 group I signature | 371 | 389 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | PRINTS | E-class P450 group I signature | 412 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco10g1935 | 523 | FunFam | Cytochrome P450 76C4 | 23 | 513 | - | - | |
| Cco10g1935 | 523 | SUPERFAMILY | Cytochrome P450 | 32 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | CDD | CYP76-like | 59 | 514 | - | - | |
| Cco10g1935 | 523 | Gene3D | Cytochrome P450 | 20 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g1935 | 523 | Pfam | Cytochrome P450 | 32 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco07g0147 | Cco-Chr7:1507049 | Cco10g1935 | Cco-Chr10:32920724 | 1.70E-94 | dispersed | |
| Cco07g0148 | Cco-Chr7:1517853 | Cco10g1935 | Cco-Chr10:32920724 | 1.00E-94 | dispersed | |
| Cco10g1935 | Cco-Chr10:32920724 | Cco11g0041 | Cco-Chr11:496808 | 3.00E-92 | dispersed | |
| Cco10g1935 | Cco-Chr10:32920724 | Cco05g2865 | Cco-Chr5:36271161 | 9.00E-81 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco10g1935 | - | - | - | 0.0 |