Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1948 ATGGCAGATCCCTCGTCAGACTCTACCACCAGCAACGCATCGGCCTCTGCCACCGCCACCGCCACCAATGACGCGAGTTCTGCCCCACCCGTAGTTACGCCAGTGCCCAAGCGAGCTTGGGGCGATGAAGAAGATGATGATGTGGGTGATGCTGGAGATTCATCCTCTGCACCTACGGAGTACTTGGAATCCCTTAAAATTCAAGACGAAACAACGCTTGAAGAACCCATTGACTCTGACATCACAGCGGTGACAACCGGTGAGACTCCGTATACATCAGCTAGTACTTTTGAGGATCTGAATCTGTCTAAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAAGTTTACCTATGATCTTGACTCCTCCTTACAAAGACTTAATTGCTCAAGCACACAACGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACTTGAAGGCTCCGCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACACTGGGATAACTTCAGAATGTGCTATTCCTGCTGACAGTGCTAACTATGTGCCTATGTCAAAGCGACCACCAATAACTGCGCAAGTTGTGATCGGAACTCCTGGCACAATAAAGAAATGGATGACAGCGAGGAAGTTGGGAGTAAGTTGCGTGAAGATTCTCGTTTTTGATGAGGCTGATCATATGCTTAGCGAGGATGGCTTTCAGGATGATTCATTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTTCTTCTGTTCTCTGCGACATTTGATGAGAATGTTAAAAAGTTTGTCTCTAGGGTTGTCAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATTCAAGTTGATATGTCCAGATGAATTAACTAAAATTCGGGTCATAAAAGATAGAATTTTCGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGCACAAGAAACAGTGCTGGCATGTTACATAAGGCACTTGTTGATCTTGGTTATGATGTGACTACCATTCAAGGGGCAATGACCAATGAAATTAGAGACAAAATAATAAAAGAGTTCAAGGACGGTTTGACCAAAGTTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAACAGGTCAACCTAGTTATCAATTATGATCTTCCTCTTAAATATGAATCTTCTTCACAAACGACAAAATACAGATTTTCCTCATCGGCTGATCCTAACTATGAGGTGTACCTTCACAGAATTGGTCGAGCAGGTCGTTTTGGGCGCAAGGGAGCTGTGTTTAACTTGCTGTGTGGTGAAGAGGAAATTATGCGAATGGACAAAATTCAGAAGCATTTTGGGTCTGAAATAATTGAGGTTCGAGACTCCGACGAGGACATTCAAGCAGCCTTAAAAACTGCCGGATTGGTTTGA 1527 43.16 MADPSSDSTTSNASASATATATNDASSAPPVVTPVPKRAWGDEEDDDVGDAGDSSSAPTEYLESLKIQDETTLEEPIDSDITAVTTGETPYTSASTFEDLNLSKELLKGLYVEMRFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAIPADSANYVPMSKRPPITAQVVIGTPGTIKKWMTARKLGVSCVKILVFDEADHMLSEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKKFVSRVVKDYNQLFVKKEELSLESVKQFKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGAMTNEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSSQTTKYRFSSSADPNYEVYLHRIGRAGRFGRKGAVFNLLCGEEEIMRMDKIQKHFGSEIIEVRDSDEDIQAALKTAGLV 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33045048 33047817 + CcPI632755_10g019480.1 Cco10g1948 190906
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0858 Cco-Chr1:9168774 Cco10g1948 Cco-Chr10:33045048 3.60E-241 dispersed
Cco10g1948 Cco-Chr10:33045048 Cco09g0073 Cco-Chr9:627065 1.40E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1948 K18655 - csv:101222195 874.774