Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g2018 ATGGAGATTGAGCCTCCTCTAGTAGAAAGTGCCGATTGCTTTTTTTCTGTTTTTGTCCCGCCGATTTTGGTCTACGCCTGCTATACAGTGGTTACTGCCGAGATCTGTGTTGCCGGATCCTTTTGTTGTGTGTTTTCGGTTCTCTTTGGATTGATAGAAGTTTTTTTTAGGGTGATCGCTTTGTCTCATTACATTTGGAGCCTGACAAATCGAGACTTATTCGATCTGCAACCGCTTCCGCCAGTTTTCGGTCTTACTTCTAAGGAGAATATGGCGACTAGAGGTCAAGGTGGTATCCAACAATTGCTTGCTGCGGAGCAAGAAGCACAACACATCGTCAATGCTGCCAGAAATGCAAAAATGGCTAGACTGAAACAAGCCAAAGAAGAGGCTGAAAAGGAAATTGCTGCATATCGCGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTTGCTGAGAGTAGCGGAGATTCAGGAGCTAATGTTAAGCGGCTTGAGATCGAGACAGATGAAAAGATTTATCACCTGAAAGAAGAGTCTGCGAGAATTTCACACGACGTTGTGAACATGCTTCTGAAGCACGTGACAACCGTGAAAAATTGA 600 44.33 MEIEPPLVESADCFFSVFVPPILVYACYTVVTAEICVAGSFCCVFSVLFGLIEVFFRVIALSHYIWSLTNRDLFDLQPLPPVFGLTSKENMATRGQGGIQQLLAAEQEAQHIVNAARNAKMARLKQAKEEAEKEIAAYRAQVESEFQRKLAESSGDSGANVKRLEIETDEKIYHLKEESARISHDVVNMLLKHVTTVKN 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33665597 33668895 + CcPI632755_10g020180.1 Cco10g2018 190976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g2018 199 Coils Coil 114 148 - -
Cco10g2018 199 Gene3D - 89 199 - -
Cco10g2018 199 FunFam V-type proton ATPase subunit G 92 199 - -
Cco10g2018 199 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 93 199 IPR005124 GO:0016471(InterPro)|GO:0016471(PANTHER)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cco10g2018 199 NCBIfam V-type ATPase subunit G 91 198 IPR005124 GO:0016471(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cco10g2018 199 Pfam Vacuolar (H+)-ATPase G subunit 96 198 IPR005124 GO:0016471(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1845 Cco-Chr8:29450545 Cco10g2018 Cco-Chr10:33665597 2.50E-16 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g2018 K02152 - csv:101216393 180.644