Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco10g2062 | ATGGGTGATGATGATAAGGTGATTGGAAATGCTCAGTCTGTTCCTGGAAGATGGCACAGAAGCAAAGGCCAAACCCATAAATCCCAGATTCAAGAAACTCCTGTAATTTTGTGTCCAGTGACTGGCCTTTTAGAAAAAATGGTTAAACCCTGCTGGAAGCCTCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCGTTGAGTATGACCAATCCAGGTCCGCAGGGGACCTTTGTAGGAGTTTATGATGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTACACCAAGACATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTATATATTGCAAATGCAGGCGATTCACGAGTAGTGCTGGGGAGAACTGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAGTCTGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCCCAGATTGTGATCCTAAAGCACAATGTTTGGCGTGTTAAAGGTCTCATACAGGTTTCAAGATCCATTGGTGATGCATATTTGAAAAAAGCAAAGTTCAATAGACCTCCTCTCCCGCCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGCGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCCCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCAAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGTGTGAGAAGGCATTTCCACGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGCAGGCCCTCCCCTTGTTCCTTATCAATCAAAGGAGGAGAAGGTCTCCCCTCATCGGCAAACTCCTAG | 1251 | 44.52 | MGDDDKVIGNAQSVPGRWHRSKGQTHKSQIQETPVILCPVTGLLEKMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQDISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPSPCSLSIKGGEGLPSSANS | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 34000408 | 34002839 | - | CcPI632755_10g020620.1 | Cco10g2062 | 191020 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco10g2062 | 416 | CDD | PP2Cc | 78 | 388 | IPR001932 | - | |
Cco10g2062 | 416 | ProSiteProfiles | PPM-type phosphatase domain profile. | 80 | 388 | IPR001932 | - | |
Cco10g2062 | 416 | PANTHER | PROTEIN PHOSPHATASE | 73 | 387 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cco10g2062 | 416 | SUPERFAMILY | PP2C-like | 79 | 390 | IPR036457 | - | |
Cco10g2062 | 416 | ProSitePatterns | PPM-type phosphatase domain signature. | 114 | 122 | IPR000222 | GO:0043169(InterPro) | |
Cco10g2062 | 416 | Gene3D | - | 69 | 395 | IPR036457 | - | |
Cco10g2062 | 416 | Pfam | Protein phosphatase 2C | 110 | 357 | IPR001932 | - | |
Cco10g2062 | 416 | SMART | PP2C_4 | 58 | 386 | IPR001932 | - | |
Cco10g2062 | 416 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cco10g2062 | 416 | FunFam | Phosphatase 2C family protein | 69 | 397 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g1830 | Cco-Chr4:33120802 | Cco10g2062 | Cco-Chr10:34000408 | 5.90E-141 | dispersed | |
Cco10g0049 | Cco-Chr10:526326 | Cco10g2062 | Cco-Chr10:34000408 | 2.10E-138 | dispersed | |
Cco10g0188 | Cco-Chr10:1823425 | Cco10g2062 | Cco-Chr10:34000408 | 1.20E-28 | dispersed | |
Cco10g1737 | Cco-Chr10:30917255 | Cco10g2062 | Cco-Chr10:34000408 | 1.30E-116 | dispersed | |
Cco10g2062 | Cco-Chr10:34000408 | Cco11g0828 | Cco-Chr11:9919661 | 4.40E-22 | dispersed | |
Cco10g2062 | Cco-Chr10:34000408 | Cco02g1482 | Cco-Chr2:27321987 | 6.10E-149 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco10g2062 | K01102 | - | csv:101210750 | 738.413 |