Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g2062 ATGGGTGATGATGATAAGGTGATTGGAAATGCTCAGTCTGTTCCTGGAAGATGGCACAGAAGCAAAGGCCAAACCCATAAATCCCAGATTCAAGAAACTCCTGTAATTTTGTGTCCAGTGACTGGCCTTTTAGAAAAAATGGTTAAACCCTGCTGGAAGCCTCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCGTTGAGTATGACCAATCCAGGTCCGCAGGGGACCTTTGTAGGAGTTTATGATGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTACACCAAGACATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTATATATTGCAAATGCAGGCGATTCACGAGTAGTGCTGGGGAGAACTGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAGTCTGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCCCAGATTGTGATCCTAAAGCACAATGTTTGGCGTGTTAAAGGTCTCATACAGGTTTCAAGATCCATTGGTGATGCATATTTGAAAAAAGCAAAGTTCAATAGACCTCCTCTCCCGCCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGCGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCCCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCAAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGTGTGAGAAGGCATTTCCACGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGCAGGCCCTCCCCTTGTTCCTTATCAATCAAAGGAGGAGAAGGTCTCCCCTCATCGGCAAACTCCTAG 1251 44.52 MGDDDKVIGNAQSVPGRWHRSKGQTHKSQIQETPVILCPVTGLLEKMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQDISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPSPCSLSIKGGEGLPSSANS 416
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 34000408 34002839 - CcPI632755_10g020620.1 Cco10g2062 191020
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco10g2062 416 CDD PP2Cc 78 388 IPR001932 -
Cco10g2062 416 ProSiteProfiles PPM-type phosphatase domain profile. 80 388 IPR001932 -
Cco10g2062 416 PANTHER PROTEIN PHOSPHATASE 73 387 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cco10g2062 416 SUPERFAMILY PP2C-like 79 390 IPR036457 -
Cco10g2062 416 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169(InterPro)
Cco10g2062 416 Gene3D - 69 395 IPR036457 -
Cco10g2062 416 Pfam Protein phosphatase 2C 110 357 IPR001932 -
Cco10g2062 416 SMART PP2C_4 58 386 IPR001932 -
Cco10g2062 416 MobiDBLite consensus disorder prediction 1 30 - -
Cco10g2062 416 FunFam Phosphatase 2C family protein 69 397 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1830 Cco-Chr4:33120802 Cco10g2062 Cco-Chr10:34000408 5.90E-141 dispersed
Cco10g0049 Cco-Chr10:526326 Cco10g2062 Cco-Chr10:34000408 2.10E-138 dispersed
Cco10g0188 Cco-Chr10:1823425 Cco10g2062 Cco-Chr10:34000408 1.20E-28 dispersed
Cco10g1737 Cco-Chr10:30917255 Cco10g2062 Cco-Chr10:34000408 1.30E-116 dispersed
Cco10g2062 Cco-Chr10:34000408 Cco11g0828 Cco-Chr11:9919661 4.40E-22 dispersed
Cco10g2062 Cco-Chr10:34000408 Cco02g1482 Cco-Chr2:27321987 6.10E-149 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g2062 K01102 - csv:101210750 738.413