Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco11g0079 | ATGGCAATGCCACAAGTAGTTGTTGTCGTGTTGATGTTTTTGTTTTTGGGTTTAGCATCCAACGCTCAACTTTCCTCCACATTTTACGACCAAACTTGTCCAATTGCACTCACCACGATTAGAATGGTTATTAGGCAAGCAATTTCTCGAGAACGTCGAATGGTTGCATCTCTCATTCGCCTCCATTTTCACGATTGCTTCGTTCAAGGTTGTGATGCGTCAATATTGCTTGACGATACTCCTTCTATGATTGGTGAACAAAATGCAGCACCCGATAGAAACTCTGCTAGAGGTTACGGGGTGATTCATAAGGCTAAGACTGAAATTGAGAAGAAATGTCTCGGTGTTGTATCTTGTGCCGATATTCTTTCTGTGGCTGCAAAGGATGCTTCTTTTGCTATGAATAAAGGTCTTAGTACTAGAGACATGTTTGCACTATCCGGTTCTCATACTATAGGACAAGCCCAATGCTTCCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGACACAGGGTTTGCCAAGACTCGTCGCAGAAATTGTCCAACATCAGGGGGAAATGGCAATTTGGCACCCCTTGATTTGGTCACACCGAATTCCTTTGATAACAACTACTTCAAAAATCTTATTCAAAGAAATGGCTTGCTAGAAACTGATCAAGTTCTTTTTAATGGAGGATCGACGGATAACATTGTTAGAGAGTATAGTAGAGATCCAACTATATTCAAATCTGACTTTACAACTGCAATGGTGAAGATGGGAGACATCCAACCTCTAACCGGCTTGGAAGGACAAATAAGAAATATATGTGGTGCTGTAAACTAA | 828 | 40.58 | MAMPQVVVVVLMFLFLGLASNAQLSSTFYDQTCPIALTTIRMVIRQAISRERRMVASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPDRNSARGYGVIHKAKTEIEKKCLGVVSCADILSVAAKDASFAMNKGLSTRDMFALSGSHTIGQAQCFLFRNRIYNQSNIDTGFAKTRRRNCPTSGGNGNLAPLDLVTPNSFDNNYFKNLIQRNGLLETDQVLFNGGSTDNIVREYSRDPTIFKSDFTTAMVKMGDIQPLTGLEGQIRNICGAVN | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 831253 | 832391 | - | CcPI632755_11g000790.1 | Cco11g0079 | 191315 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco11g0079 | 275 | FunFam | Peroxidase | 124 | 254 | - | - | |
Cco11g0079 | 275 | ProSitePatterns | Peroxidases active site signature. | 55 | 66 | IPR019794 | GO:0004601(InterPro) | |
Cco11g0079 | 275 | PANTHER | PEROXIDASE 72-RELATED | 9 | 131 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | Pfam | Peroxidase | 133 | 239 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 142 | 152 | IPR019793 | - | |
Cco11g0079 | 275 | Gene3D | - | 27 | 133 | - | - | |
Cco11g0079 | 275 | Gene3D | - | 255 | 271 | - | - | |
Cco11g0079 | 275 | ProSiteProfiles | Plant heme peroxidase family profile. | 23 | 275 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | PRINTS | Haem peroxidase superfamily signature | 195 | 210 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | PRINTS | Haem peroxidase superfamily signature | 55 | 69 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | PRINTS | Haem peroxidase superfamily signature | 142 | 157 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | CDD | secretory_peroxidase | 23 | 274 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Cco11g0079 | 275 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | PRINTS | Plant peroxidase signature | 33 | 52 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | PRINTS | Plant peroxidase signature | 57 | 77 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | SUPERFAMILY | Heme-dependent peroxidases | 23 | 275 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco11g0079 | 275 | Gene3D | Peroxidase, domain 2 | 134 | 254 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco11g0079 | Cco-Chr11:831253 | Cco11g0108 | Cco-Chr11:1159819 | 1.50E-127 | dispersed | |
Cco11g0079 | Cco-Chr11:831253 | Cco11g0594 | Cco-Chr11:6349590 | 3.30E-82 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco11g0079 | K00430 | - | csv:116403992 | 451.055 |