Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0221 ATGAGGATCGTCGAATTGGAAGATGCTGGAAATGATCGGGAAAATGAAATCGGTAGTGGTCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTGTTTTACCCTACCCTTTTGTATAACGTGCTTCGGAACAAAATGGAAGCTGAATTCAGATGGTGGGATGAAGTTGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTCCCAAGATTGAAGAAGCTTGGTGTTGGTGGTGTTATCACTCTCAATGAACCTTATGAAACACTAGTTCCATCGTCTTTGTATTATCACCATGGAATCGACCACTTAAAGATCCCAACGAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATTAGCCGAGCTGTGGACTTCATTCACAGAAATGCATCATCTGGTAAAACAACATACGTCCATTGTAAAGCAGGACGAGGAAGGAGCACAACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCACTGGAATACGTCCGCTCTAGAAGGCCACGTGTGTTACTTGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCATGGACCGGTTACAAGTTCTAGTTCACCCTCTGGAGGAGATGCAGTCCTCATTACAAAAGACGATCTAGAAGGATATCATGGTACATGCATCGACAGTGCGGGTAGAGAACTTGCAGTAGTCCCTCGGATGAGTAAGTCAAAGCCGATGATAGCAAGGTTGTCCTGCCTCTTTTCCTCTTTGATAATTCATGGCAGTACTGGATCTCTCATTAAGCGTCTGCCAGCACCGGAGGCTCGTGCTTGTTGA 855 45.96 MRIVELEDAGNDRENEIGSGQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYYHHGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNASSGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSNHGPVTSSSSPSGGDAVLITKDDLEGYHGTCIDSAGRELAVVPRMSKSKPMIARLSCLFSSLIIHGSTGSLIKRLPAPEARAC 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2153352 2155392 - CcPI632755_11g002210.1 Cco11g0221 191457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0221 284 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 3 256 - -
Cco11g0221 284 Pfam Dual specificity phosphatase, catalytic domain 99 202 IPR000340 GO:0016311(InterPro)
Cco11g0221 284 FunFam Dual specificity phosphatase domain protein 59 205 - -
Cco11g0221 284 CDD PTPMT1 59 203 IPR044596 GO:0004721(InterPro)
Cco11g0221 284 SMART dsp_5 62 203 IPR020422 GO:0006470(InterPro)
Cco11g0221 284 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311(InterPro)
Cco11g0221 284 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470(InterPro)
Cco11g0221 284 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 201 IPR029021 -
Cco11g0221 284 Gene3D Protein tyrosine phosphatase superfamily 59 204 IPR029021 -
Cco11g0221 284 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco10g0247 Cco-Chr10:2632763 Cco11g0221 Cco-Chr11:2153352 1.50E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0221 - - - 0.0