Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco11g0302 | ATGGTGGGTTGGATTTTTTGTTGGTTTTTGTTAGTGGTGGTTCTAAGGGCGGCGATGGTTCTGTGGTGGCGGCCGAGAAGAATCGAAGAGCATTTTTTCCGGCAAGGAATTCGTGGCCCTCCTTATCGTTTCTTCATCGGAAATGTTAAGGAACTTGTCGGAATGATGATTAAAGCTTCTTCTGATCTTTCTTTTCCTAATTCTTCTCATAATATTCTCCCTCGTGTTCTTCCTTTTTATCATCACTGGAAGAAAATTTATGGGTCAAAATTTCTAGTGTGGTTTGGGCCAACGGTGAGATTGGCAGTGTCTGATCCAGACTTGATTCGAGAAATCTTCACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCACCCACTTGTTAAACAGCTAGAAGGTGATGGTCTTCTAAGTCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATTATCTCTCCTTCTTTCCACATGGACAATCTCAGATTGTTGATTCCAGTGATGGCAAAAAGTGTCGTGGACATGTTGGAGAAATGGTCAGCATTAATGACGTCAGCAGATTCCGGTGAGATGGAAATTGAAGTTTCCGAATGGTTCCAAACCCTAACTGAAGATGTCATCACTAGGACAGCATTTGGCTCTAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCCCAACAAATGGTCCTTGCTTCTCAAGCCTTTGAAAAAGTTTTCATCCCTGGCTATAGATTCCTACCTACGAGAACAAATGTGAATTCGTGGAGACTGGATAGAGAAATAAGGAAATCGTTGATGAAATTGATCGACCGACGACGGGAGAATTCCATCGAGACGAGCTCTAAGGATTTACTAGGGTTAATGATTAGGGCATCAAAGTCTTCTCCATCATCTACAATCACTGTTAATGACATTGTTGAAGAGTGCAAAGGGTTTTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGATGAAGTACTAAGGATGTGTGGAGCACGTGACATACCCTCCAAAGATGATGTTACAAAGCTCAAAATGTTGAGTATGATCATCAATGAATCGTTACGGTTATATCCGCCGACCGTCGCAACTATTCGACAAGCGAAAGTTGACGTGGAGCTTGGTGGTTACATGATTCCACGTGGCACTGAGCTATTGATTCCGATTTTAGCTGTTCACCATGATCAAACGATATGGGGTAATGATGTGAATGAGTTCAATCCAGGGCGATTTGTTGAAGGTGTTGCAAAGGCAGCCAATCATCGAGTTGGGTTCATTCCGTTCGGGTTAGGAGCTCGAACTTGCATCGGCCAAAACTTGGCTATATTGCAAGCAAAATTGGCTCTTGCACTCATACTTCAAAGATTCTCTTTTCGACTGGGACCCTCTTATAAACATTCACCAGCGGTTCAAATGCTACTTTATCCACAACATGGTGCACCTATTATTTTCCAAAAATTATCCACTCCATTGATCCATCAAGATCAACATTCATGA | 1560 | 42.5 | MVGWIFCWFLLVVVLRAAMVLWWRPRRIEEHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDLSFPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLRLLIPVMAKSVVDMLEKWSALMTSADSGEMEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDREIRKSLMKLIDRRRENSIETSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVQARDEVLRMCGARDIPSKDDVTKLKMLSMIINESLRLYPPTVATIRQAKVDVELGGYMIPRGTELLIPILAVHHDQTIWGNDVNEFNPGRFVEGVAKAANHRVGFIPFGLGARTCIGQNLAILQAKLALALILQRFSFRLGPSYKHSPAVQMLLYPQHGAPIIFQKLSTPLIHQDQHS | 519 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3027149 | 3030178 | + | CcPI632755_11g003020.1 | Cco11g0302 | 191538 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco11g0302 | 519 | Gene3D | Cytochrome P450 | 22 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | SUPERFAMILY | Cytochrome P450 | 71 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | CDD | CYP734 | 77 | 502 | - | - | |
Cco11g0302 | 519 | PRINTS | P450 superfamily signature | 317 | 334 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | PRINTS | P450 superfamily signature | 456 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | PRINTS | P450 superfamily signature | 370 | 381 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Cco11g0302 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 9 | 500 | IPR050665 | GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER) | |
Cco11g0302 | 519 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | PRINTS | E-class P450 group I signature | 84 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | PRINTS | E-class P450 group I signature | 306 | 323 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | PRINTS | E-class P450 group I signature | 326 | 352 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | PRINTS | E-class P450 group I signature | 202 | 220 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco11g0302 | 519 | FunFam | Cytochrome P450 734A1 | 22 | 509 | - | - | |
Cco11g0302 | 519 | Pfam | Cytochrome P450 | 80 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco11g0302 | Cco-Chr11:3027149 | Cco11g1763 | Cco-Chr11:30369079 | 3.00E-105 | dispersed | |
Cco03g1688 | Cco-Chr3:31601885 | Cco11g0302 | Cco-Chr11:3027149 | 1.00E-49 | transposed | |
Cco04g1162 | Cco-Chr4:27041090 | Cco11g0302 | Cco-Chr11:3027149 | 1.10E-34 | transposed | |
Cco05g2035 | Cco-Chr5:29433695 | Cco11g0302 | Cco-Chr11:3027149 | 6.40E-26 | transposed | |
Cco10g1506 | Cco-Chr10:28251196 | Cco11g0302 | Cco-Chr11:3027149 | 3.60E-106 | transposed | |
Cco11g1359 | Cco-Chr11:26416175 | Cco11g0302 | Cco-Chr11:3027149 | 3.30E-15 | transposed | |
Cco11g0302 | Cco-Chr11:3027149 | Cco06g1249 | Cco-Chr6:22529785 | 2.00E-226 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco11g0302 | K15639 | - | csv:101208789 | 996.497 |