Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0544 ATGGCGGTTCCCCTGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTCCTCGGGATGCTTGTGGCAGCTCTTCTGTTCATTTGGACTTTGCACTTCCGTGGAGGATTAGCACTTATCTCAGAAAACAAGGATCACATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATTCTTCTTAATGGTGAAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTTAGAAAACTAGTTCATCTTGCACTCCAATTTGTTGCATTCTTTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGAATCGACAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTGTTTGGCATCCAGTGGTCTGCAGGTTTTGTAACCTTTTGGTACCCAGGTGGCTCTAGAAACAGCAGAGCTACTCTGTTGCCATGGCACGTTTTCTTTGGCATTTACATATATGGCCTTTCAATTGCTACAACTGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTGCGCTATTCGAATGAGGCCTTGCTGATAAATTCATTGGGTGTCCTGATTGTTCTCTTGGGTGGTCTCGTGATTCTGGCTGTCATCGCTCCGTCGAATGCCAAAGGTGATGTTAACAGAGGACTAGCAGAATAG 699 43.35 MAVPLVQFPIFMAVRVLGMLVAALLFIWTLHFRGGLALISENKDHIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLALQFVAFFLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWSAGFVTFWYPGGSRNSRATLLPWHVFFGIYIYGLSIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGVLIVLLGGLVILAVIAPSNAKGDVNRGLAE 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 5767083 5769175 + CcPI632755_11g005440.1 Cco11g0544 191780
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0544 232 SMART 561_7 49 175 IPR006593 -
Cco11g0544 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Cco11g0544 232 ProSiteProfiles Cytochrome b561 domain profile. 13 217 IPR006593 -
Cco11g0544 232 PANTHER CYTOCHROME B561-RELATED 1 221 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Cco11g0544 232 FunFam Cytochrome b reductase 1 4 225 - -
Cco11g0544 232 CDD Cyt_b561_ACYB-1_like 40 183 - -
Cco11g0544 232 Gene3D - 2 229 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco09g1370 Cco-Chr9:16655596 Cco11g0544 Cco-Chr11:5767083 2.10E-53 dispersed
Cco11g0544 Cco-Chr11:5767083 Cco05g2578 Cco-Chr5:34027209 1.30E-47 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0544 K08360 - csv:101212633 415.616