Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco11g0544 | ATGGCGGTTCCCCTGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTCCTCGGGATGCTTGTGGCAGCTCTTCTGTTCATTTGGACTTTGCACTTCCGTGGAGGATTAGCACTTATCTCAGAAAACAAGGATCACATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATTCTTCTTAATGGTGAAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTTAGAAAACTAGTTCATCTTGCACTCCAATTTGTTGCATTCTTTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGAATCGACAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTGTTTGGCATCCAGTGGTCTGCAGGTTTTGTAACCTTTTGGTACCCAGGTGGCTCTAGAAACAGCAGAGCTACTCTGTTGCCATGGCACGTTTTCTTTGGCATTTACATATATGGCCTTTCAATTGCTACAACTGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTGCGCTATTCGAATGAGGCCTTGCTGATAAATTCATTGGGTGTCCTGATTGTTCTCTTGGGTGGTCTCGTGATTCTGGCTGTCATCGCTCCGTCGAATGCCAAAGGTGATGTTAACAGAGGACTAGCAGAATAG | 699 | 43.35 | MAVPLVQFPIFMAVRVLGMLVAALLFIWTLHFRGGLALISENKDHIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLALQFVAFFLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWSAGFVTFWYPGGSRNSRATLLPWHVFFGIYIYGLSIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGVLIVLLGGLVILAVIAPSNAKGDVNRGLAE | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 5767083 | 5769175 | + | CcPI632755_11g005440.1 | Cco11g0544 | 191780 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco11g0544 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Cco11g0544 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Cco11g0544 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 217 | IPR006593 | - | |
| Cco11g0544 | 232 | PANTHER | CYTOCHROME B561-RELATED | 1 | 221 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Cco11g0544 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Cco11g0544 | 232 | CDD | Cyt_b561_ACYB-1_like | 40 | 183 | - | - | |
| Cco11g0544 | 232 | Gene3D | - | 2 | 229 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco09g1370 | Cco-Chr9:16655596 | Cco11g0544 | Cco-Chr11:5767083 | 2.10E-53 | dispersed | |
| Cco11g0544 | Cco-Chr11:5767083 | Cco05g2578 | Cco-Chr5:34027209 | 1.30E-47 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco11g0544 | K08360 | - | csv:101212633 | 415.616 |