Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0594 ATGGCTGATTCAAGATTCAGAGGAGTTTTGGTTTTGACTTTGGCTTTGTTTATGCTCTTTTTGGGGAATGTCTCAGCTCAACTTTCTACTGGGTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACCGTCAAATCCTCTGTTCGATCTGCTGTCTCCAGTGAAGCTCGAATGGGCGCTTCCATTCTTCGCTTGTTTTTTCATGACTGTTTCGTCAATGGATGCGACGGGTCCATTTTGTTAGACGACACGGCAAGCTTTACTGGAGAGAAAAATGCAAACCCCAATAGAAACTCAGCTAGAGGCTTTGATGTCATTGATAACATTAAAACCGCTGTCGAAAAAGCTTGTCCTGGCGTTGTTTCTTGTGCTGATATTCTTGCTATTGCTGCTCGTGACTCTGTCGTTCTCCTAGGAGGGCCAAGCTGGAATGTGAAGTTGGGAAGAAGAGACGCCACAACTGCGAGCCAATCCCAAGCCAACAGCGATATCCCCGGGCCAACTTCAACTTTAAACCAACTCAGCTCTAGATTCAGCGCTCTCGGACTCTCCAACACCGACTTAGTTGCCCTTTCAGGCGGGCACACGATCGGACAAGCACAGTGCACGACATTTAGAGGGAGAATATACAGCAATGGCACAAACATTGAGAGTTCATTTGCAAGAACAAGGCAAAGCAATTGCCCCAATACCTCAGGAACTGGAGACAACAATTTGGCTCCTTTGGATTTGCAAACTCCAAACTCATTTGACAACAACTACTTCAAGAATCTTCTTCAAAACAAGGGCCTTCTACAATCGGATCAAGTTCTCTTCAATGGCGGATCTACAGATTCCACTGTTCAAAATTACGCAAATGCCCCTGCTCGTTTCTTCTCTGATTTTGCTGCTGCCATGGTGAAGATGGGAGATATCAGTCCTCTTACTGGCTCCAATGGTGAAATTAGGAAGGACTGCAGGAGGGTTAACTAA 972 45.37 MADSRFRGVLVLTLALFMLFLGNVSAQLSTGFYSSSCPNLLSTVKSSVRSAVSSEARMGASILRLFFHDCFVNGCDGSILLDDTASFTGEKNANPNRNSARGFDVIDNIKTAVEKACPGVVSCADILAIAARDSVVLLGGPSWNVKLGRRDATTASQSQANSDIPGPTSTLNQLSSRFSALGLSNTDLVALSGGHTIGQAQCTTFRGRIYSNGTNIESSFARTRQSNCPNTSGTGDNNLAPLDLQTPNSFDNNYFKNLLQNKGLLQSDQVLFNGGSTDSTVQNYANAPARFFSDFAAAMVKMGDISPLTGSNGEIRKDCRRVN 323
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 6349590 6350945 - CcPI632755_11g005940.1 Cco11g0594 191830
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0594 323 Gene3D Peroxidase, domain 2 165 302 - -
Cco11g0594 323 PANTHER PEROXIDASE 72-RELATED 16 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 FunFam Peroxidase 31 174 - -
Cco11g0594 323 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Cco11g0594 323 Gene3D - 31 323 - -
Cco11g0594 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cco11g0594 323 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 CDD secretory_peroxidase 27 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cco11g0594 323 FunFam Peroxidase 165 302 - -
Cco11g0594 323 Pfam Peroxidase 44 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0594 323 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2045 Cco-Chr2:33423415 Cco11g0594 Cco-Chr11:6349590 3.10E-108 dispersed
Cco02g2046 Cco-Chr2:33427945 Cco11g0594 Cco-Chr11:6349590 8.00E-109 dispersed
Cco02g2050 Cco-Chr2:33449353 Cco11g0594 Cco-Chr11:6349590 1.30E-92 dispersed
Cco02g2051 Cco-Chr2:33462766 Cco11g0594 Cco-Chr11:6349590 8.70E-95 dispersed
Cco02g2530 Cco-Chr2:37640777 Cco11g0594 Cco-Chr11:6349590 6.50E-74 dispersed
Cco02g2531 Cco-Chr2:37650492 Cco11g0594 Cco-Chr11:6349590 8.20E-77 dispersed
Cco04g1423 Cco-Chr4:29638604 Cco11g0594 Cco-Chr11:6349590 1.20E-88 dispersed
Cco04g1755 Cco-Chr4:32544783 Cco11g0594 Cco-Chr11:6349590 1.30E-88 dispersed
Cco04g1813 Cco-Chr4:33006412 Cco11g0594 Cco-Chr11:6349590 1.10E-14 dispersed
Cco07g0944 Cco-Chr7:21624347 Cco11g0594 Cco-Chr11:6349590 2.40E-87 dispersed
Cco09g1278 Cco-Chr9:13885720 Cco11g0594 Cco-Chr11:6349590 3.00E-75 dispersed
Cco09g1704 Cco-Chr9:28430584 Cco11g0594 Cco-Chr11:6349590 1.90E-63 dispersed
Cco09g1962 Cco-Chr9:33655216 Cco11g0594 Cco-Chr11:6349590 3.00E-72 dispersed
Cco11g0108 Cco-Chr11:1159819 Cco11g0594 Cco-Chr11:6349590 1.10E-105 dispersed
Cco11g0109 Cco-Chr11:1164916 Cco11g0594 Cco-Chr11:6349590 1.70E-106 dispersed
Cco11g0594 Cco-Chr11:6349590 Cco11g0729 Cco-Chr11:8032282 1.90E-60 dispersed
Cco01g0502 Cco-Chr1:4882541 Cco11g0594 Cco-Chr11:6349590 6.60E-77 transposed
Cco05g2597 Cco-Chr5:34229134 Cco11g0594 Cco-Chr11:6349590 9.20E-77 transposed
Cco11g0079 Cco-Chr11:831253 Cco11g0594 Cco-Chr11:6349590 3.30E-82 transposed
Cco11g0594 Cco-Chr11:6349590 Cco03g0025 Cco-Chr3:278377 1.00E-95 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0594 K00430 - csv:101218447 566.614