Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0627 ATGACAAGTTATTATGATATTGATGACATTCTAGCAGAGGAAGAGCTTGTCTCAGTTGTGTTCCAAAAGGCAGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCGTTCTGGCTTGCACAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTTCCTGTTTTAACCAAAGAACACGGCTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGATGCCCATTCTTCTATGAATTTGGATGCAAGATTGCACCTCTGGTTGGCGATAGAACGATTGGTTCTTGGCTTTTATCGACATTCAAGAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATATTTGGCACTTCTGTCAAAAGAAGAAACCAAGATGTATGAAGCAGCTCAATCCTCTATGACAGCCTTCAAAAAATGGCGAATGGGTGGGCCTAGATTCCAGAAAGCATCCTTTCTAAGCAGGAAGAGGAAGTCATCTGAGTAG 558 42.47 MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMGLPSCFNQRTRLEIQADAAFVDLRSRCPFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLSRKRKSSE 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6805405 6807812 - CcPI632755_11g006270.1 Cco11g0627 191863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0627 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
Cco11g0627 185 Pfam GINS/PriA/YqbF domain 5 55 - -
Cco11g0627 185 Pfam GINS complex protein helical bundle domain 66 165 IPR021151 -
Cco11g0627 185 CDD GINS_A_psf3 65 167 - -
Cco11g0627 185 SUPERFAMILY PriA/YqbF domain 1 66 - -
Cco11g0627 185 PANTHER UNCHARACTERIZED 1 183 IPR010492 GO:0000811(PANTHER)|GO:1902975(PANTHER)
Cco11g0627 185 Gene3D - 1 167 IPR038437 -
Cco11g0627 185 CDD GINS_B_Psf3 4 66 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0627 K10734 - csv:101203869 355.91