Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0653 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCGTTAGGGTACAATGAGTCCAAGTTGGCGGTTATTATGGCATCTTTCATCATTCAGAAACCGCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTGAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAGCATTAACGCGGATGATGCACACTCAAAGGGATGGCTTGGTCGTAGCAATGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCAAGAAGAAAACTGAACCAAGTAAATAAACCACGTTCTGCCAATGACCCTGAGTATAGTAATACAGAGCTGAAGGAACCTGATGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACACAGTCCAAGAAACAGAAACTAAGATGGTAGAGATGTCTGCTCTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACATCTTTATGAACAGGCTGTTGAAGCTACGAAGAATGTCGAGCTTGGTAATAAAGAACTTACCCAAGCAATTCAGCGGAATAGCAGCAGCAGAACCTTCCTTCTGCTTTTTCTATTTGTGCTCACCTTTTCAATTCTCTTTCTTGATTGGTACAGTTGA 930 40.97 MAKFRDRTEDFKDVVRHCAISLGYNESKLAVIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQLDILKNSINADDAHSKGWLGRSNDDSNADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKLNQVNKPRSANDPEYSNTELKEPDDNFEHQPVRAQQLLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELGNKELTQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7115058 7117828 - CcPI632755_11g006530.1 Cco11g0653 191889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0653 309 SUPERFAMILY t-snare proteins 61 273 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Cco11g0653 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 5 86 IPR019529 -
Cco11g0653 309 FunFam Syntaxin-81 like 212 306 - -
Cco11g0653 309 PANTHER SYNTAXIN-18 1 309 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Cco11g0653 309 Gene3D - 212 306 - -
Cco11g0653 309 MobiDBLite consensus disorder prediction 174 197 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0653 K08492 - csv:101207161 570.081