Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0681 ATGGCTGAGATTTGGTTTGGTGCAGATGCCGATCCCCCTTCCCCGCCAAAATCTCTACCTGGCCGAAAAATGGAGTTTCTTGAGCTTAAAGCCGCCGCCGATAATGCCGGCGGTGCTTCCTCGTCCGGTCGGAAACGCCGGAGTGTGCAACCGTTTCCACGGCGGTGCGAAAATGAAGACGATGAAAACAGGGGGCAGAGGAATGATGATGAGGTTGAAGTTAAATATGGGGTGACCTCTGTTTGCGGAAGAAAAAGAGAAATGGCAGACACGGTTTCTGTTCATCTTTACTTTGCTACTCAAGAAAATGAACCCCAAATTCCTCTTCATTTTTTTGGGGTGTTCGACGGCCATGGTTGCTCTCATGTTTCGAAGAGCTGTAAGAATCGAATGCATGAAATAGTGAAAGAAGAGATTGATGAAATGGAAATAGAAGAAACAGAGGAATGGAAGAAAATAATGAGAAGAAGCTTTGGGCGTATGGATGGGGAAGTAATGAAACAGAGAGAAGAAGCCTCTTCTTCTGAATCTAATAATATTAGTTGTAGATGCGAACTTCAAACTCCAAATCGATACGACACCGTTAGATCCAATGCTCTCATTGCTCTCTTAATGCCACACAAGTTCATCATCGCCAACTGCGGCGATTCCCGCGCCGTCCTTTCCCGGAAAGCTACCGGAATCCTCCCTCTCTCCTCCGACCATAAGCCAGCTCGAGGAGATGAATTGTCACGAACAGAATCACGTGGAGGGCGCGTGAAATACCGGGAAGGGGCAAGAGTGTTGGGAGTTTATGCAACATCAAGAGCAATAGGCGATGGTTGTTTAAAGCCTTACGTGATATCGGAGCCGGAGTTGGTGATTATGGATCGAACAGCGGAGGATGAGTTCATGATATTGGCTACCGATGGCCTGTGGGACGTGGTTACAAATGAAACTGCATGCGACACAGTCCGAACGTGCATGCGTGCACACCGCCCGTTGTCGTCCTCGTCAGAATCATCGGGATCTATGAGTGGCGGGTCTGACAAAACATGTTCCGACGCCTCCATTTTACTGACCAAGTTGGCCATGGCCAATCATAGTTCAGATAACATTACCATTGTGGTTATAGATTTGAGAACAACATCATCACCACAACCAAAGCATTGA 1152 47.48 MAEIWFGADADPPSPPKSLPGRKMEFLELKAAADNAGGASSSGRKRRSVQPFPRRCENEDDENRGQRNDDEVEVKYGVTSVCGRKREMADTVSVHLYFATQENEPQIPLHFFGVFDGHGCSHVSKSCKNRMHEIVKEEIDEMEIEETEEWKKIMRRSFGRMDGEVMKQREEASSSESNNISCRCELQTPNRYDTVRSNALIALLMPHKFIIANCGDSRAVLSRKATGILPLSSDHKPARGDELSRTESRGGRVKYREGARVLGVYATSRAIGDGCLKPYVISEPELVIMDRTAEDEFMILATDGLWDVVTNETACDTVRTCMRAHRPLSSSSESSGSMSGGSDKTCSDASILLTKLAMANHSSDNITIVVIDLRTTSSPQPKH 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7413100 7414415 - CcPI632755_11g006810.1 Cco11g0681 191917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0681 383 FunFam Protein phosphatase 2C 50 97 380 - -
Cco11g0681 383 ProSitePatterns PPM-type phosphatase domain signature. 111 119 IPR000222 GO:0043169(InterPro)
Cco11g0681 383 ProSiteProfiles PPM-type phosphatase domain profile. 75 373 IPR001932 -
Cco11g0681 383 MobiDBLite consensus disorder prediction 1 70 - -
Cco11g0681 383 SMART PP2C_4 65 371 IPR001932 -
Cco11g0681 383 Pfam Protein phosphatase 2C 75 366 IPR001932 -
Cco11g0681 383 SUPERFAMILY PP2C-like 74 374 IPR036457 -
Cco11g0681 383 PANTHER PROTEIN PHOSPHATASE 65 372 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cco11g0681 383 CDD PP2Cc 74 373 IPR001932 -
Cco11g0681 383 MobiDBLite consensus disorder prediction 50 70 - -
Cco11g0681 383 Gene3D - 65 379 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1153 Cco-Chr8:23347531 Cco11g0681 Cco-Chr11:7413100 7.70E-45 dispersed
Cco11g0681 Cco-Chr11:7413100 Cco11g0828 Cco-Chr11:9919661 2.90E-20 dispersed
Cco05g1850 Cco-Chr5:27433628 Cco11g0681 Cco-Chr11:7413100 1.70E-21 transposed
Cco11g0681 Cco-Chr11:7413100 Cco03g0125 Cco-Chr3:1230429 3.40E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0681 K14497 - csv:101220425 481.485