Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco11g0681 | ATGGCTGAGATTTGGTTTGGTGCAGATGCCGATCCCCCTTCCCCGCCAAAATCTCTACCTGGCCGAAAAATGGAGTTTCTTGAGCTTAAAGCCGCCGCCGATAATGCCGGCGGTGCTTCCTCGTCCGGTCGGAAACGCCGGAGTGTGCAACCGTTTCCACGGCGGTGCGAAAATGAAGACGATGAAAACAGGGGGCAGAGGAATGATGATGAGGTTGAAGTTAAATATGGGGTGACCTCTGTTTGCGGAAGAAAAAGAGAAATGGCAGACACGGTTTCTGTTCATCTTTACTTTGCTACTCAAGAAAATGAACCCCAAATTCCTCTTCATTTTTTTGGGGTGTTCGACGGCCATGGTTGCTCTCATGTTTCGAAGAGCTGTAAGAATCGAATGCATGAAATAGTGAAAGAAGAGATTGATGAAATGGAAATAGAAGAAACAGAGGAATGGAAGAAAATAATGAGAAGAAGCTTTGGGCGTATGGATGGGGAAGTAATGAAACAGAGAGAAGAAGCCTCTTCTTCTGAATCTAATAATATTAGTTGTAGATGCGAACTTCAAACTCCAAATCGATACGACACCGTTAGATCCAATGCTCTCATTGCTCTCTTAATGCCACACAAGTTCATCATCGCCAACTGCGGCGATTCCCGCGCCGTCCTTTCCCGGAAAGCTACCGGAATCCTCCCTCTCTCCTCCGACCATAAGCCAGCTCGAGGAGATGAATTGTCACGAACAGAATCACGTGGAGGGCGCGTGAAATACCGGGAAGGGGCAAGAGTGTTGGGAGTTTATGCAACATCAAGAGCAATAGGCGATGGTTGTTTAAAGCCTTACGTGATATCGGAGCCGGAGTTGGTGATTATGGATCGAACAGCGGAGGATGAGTTCATGATATTGGCTACCGATGGCCTGTGGGACGTGGTTACAAATGAAACTGCATGCGACACAGTCCGAACGTGCATGCGTGCACACCGCCCGTTGTCGTCCTCGTCAGAATCATCGGGATCTATGAGTGGCGGGTCTGACAAAACATGTTCCGACGCCTCCATTTTACTGACCAAGTTGGCCATGGCCAATCATAGTTCAGATAACATTACCATTGTGGTTATAGATTTGAGAACAACATCATCACCACAACCAAAGCATTGA | 1152 | 47.48 | MAEIWFGADADPPSPPKSLPGRKMEFLELKAAADNAGGASSSGRKRRSVQPFPRRCENEDDENRGQRNDDEVEVKYGVTSVCGRKREMADTVSVHLYFATQENEPQIPLHFFGVFDGHGCSHVSKSCKNRMHEIVKEEIDEMEIEETEEWKKIMRRSFGRMDGEVMKQREEASSSESNNISCRCELQTPNRYDTVRSNALIALLMPHKFIIANCGDSRAVLSRKATGILPLSSDHKPARGDELSRTESRGGRVKYREGARVLGVYATSRAIGDGCLKPYVISEPELVIMDRTAEDEFMILATDGLWDVVTNETACDTVRTCMRAHRPLSSSSESSGSMSGGSDKTCSDASILLTKLAMANHSSDNITIVVIDLRTTSSPQPKH | 383 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7413100 | 7414415 | - | CcPI632755_11g006810.1 | Cco11g0681 | 191917 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco11g0681 | 383 | FunFam | Protein phosphatase 2C 50 | 97 | 380 | - | - | |
Cco11g0681 | 383 | ProSitePatterns | PPM-type phosphatase domain signature. | 111 | 119 | IPR000222 | GO:0043169(InterPro) | |
Cco11g0681 | 383 | ProSiteProfiles | PPM-type phosphatase domain profile. | 75 | 373 | IPR001932 | - | |
Cco11g0681 | 383 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Cco11g0681 | 383 | SMART | PP2C_4 | 65 | 371 | IPR001932 | - | |
Cco11g0681 | 383 | Pfam | Protein phosphatase 2C | 75 | 366 | IPR001932 | - | |
Cco11g0681 | 383 | SUPERFAMILY | PP2C-like | 74 | 374 | IPR036457 | - | |
Cco11g0681 | 383 | PANTHER | PROTEIN PHOSPHATASE | 65 | 372 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cco11g0681 | 383 | CDD | PP2Cc | 74 | 373 | IPR001932 | - | |
Cco11g0681 | 383 | MobiDBLite | consensus disorder prediction | 50 | 70 | - | - | |
Cco11g0681 | 383 | Gene3D | - | 65 | 379 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco08g1153 | Cco-Chr8:23347531 | Cco11g0681 | Cco-Chr11:7413100 | 7.70E-45 | dispersed | |
Cco11g0681 | Cco-Chr11:7413100 | Cco11g0828 | Cco-Chr11:9919661 | 2.90E-20 | dispersed | |
Cco05g1850 | Cco-Chr5:27433628 | Cco11g0681 | Cco-Chr11:7413100 | 1.70E-21 | transposed | |
Cco11g0681 | Cco-Chr11:7413100 | Cco03g0125 | Cco-Chr3:1230429 | 3.40E-85 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco11g0681 | K14497 | - | csv:101220425 | 481.485 |