Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0727 ATGGAACTTGAATCACAATCAGAGTTCCCGTATTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTCTTTGCCTCTGGAAATGTCGAGCGTGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACGGAAGATGAAAAGGTACAGCTGCATAACATGGCAGTTGATGCTAGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCGCGGCATACTGCCTCTTGTTCTGTTTGCCCAAGAGTTTACCCGACATCACGTCTACTTAGTTTACATGTGTCTGAGGCGCATGACTCGTTCTTTCAAGCAAAAGTTGCTCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGTTACAAAAGCAGACAGCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAATTACATCGTAAACAAGCCCTTCAAGGGTGGGAAGAAACCTCGGAAATGGAAGTTGAGAATGAAACTATAGATGGCCTCATTTCAGGAGTATCTAAACTAACTACTTCGGACTTAACTCCTTCGTCAATCAGCTTTGGGCGGAGGCACACTCGAGGGTTAGCATTTCTTCCTCGAGCAGTTCAGCGAGAAAAAGTGTCAGACTCCTCAACAGCTGGAACAAAGAGATGA 750 43.33 MELESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKVQLHNMAVDASSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQALQGWEETSEMEVENETIDGLISGVSKLTTSDLTPSSISFGRRHTRGLAFLPRAVQREKVSDSSTAGTKR 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8016250 8017938 - CcPI632755_11g007270.1 Cco11g0727 191963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0727 249 ProSitePatterns Zinc finger C2H2 type domain signature. 130 153 IPR013087 -
Cco11g0727 249 ProSitePatterns Zinc finger C2H2 type domain signature. 92 113 IPR013087 -
Cco11g0727 249 PANTHER UNCHARACTERIZED 5 238 IPR039258 -
Cco11g0727 249 SMART c2h2final6 90 113 IPR013087 -
Cco11g0727 249 SMART c2h2final6 128 153 IPR013087 -
Cco11g0727 249 SMART c2h2final6 63 88 IPR013087 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60256 None None None None Cco TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0727 - - - 0.0