Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0729 ATGGGGATTTTTGTGAGAAAAGGAGAAGGGCAGCTGGTGGAAAATTTTTATAAATCCACTTGTCCAAACGTGGAACAAATAGTGAGACAGGCCGTTCAAAACAAGTTCTCTCAAACTACCATTACCATTCCCGCTACTCTCCGTCTCTTCTTCCATGATTGTTTCGTTGAGGGATGCGATGCTTCGGTCATGATTTCATCGCCAAGCGGAGACGCGGAGAAGGACGCTCAAGATAACCTTTCCCTTGCTGGAGATGGCTTTGACACCGTCGTCAAGGCAAAACAGGCCGTTGAAGCCGCCTGCCTCGGCCGAGTCTCTTGCGCTGACATTTTGGCTCTCGCTGCCCGAGATGCCGTCGTCCTCGCAGGAGGCCCAAATTTCAACGTCGAATTAGGACGTCGTGACGGCCTGATCTCCAAAGCCTCACGCGTCGACAGAAATTTACCATCCCCAAATTTCAACCTCAACGCATTGACTTCCATGTTCGCCAGACATGGCCTCTCCCAAACCGACATGATCGCCCTCTCCGGCGCCCACACAATCGGCGCCTCCCACTGCAACCGCTTTTTCAATCGACTCTTCTCTGCTTCCGATGTAGATCCGTTGCTAAATCCTGCCTACGCAGAGCAGTTGAAACAAGCGTGCCCTCGAAATGTGGATCCAAGTGTGGTGGTGAAGCTGGATCCGACCACTCCAGACACTTTTGACAACGTGTATTACCAAAATCTAATGAACGGAAAAGGATTGTTTAGATCAGATGAGGTTCTGTTCACGAGCTCAGCATCGAAGGGGACGGTGGTGAGATTTGCGAACAACGGAGGGCAGTTCAATACGGCGTTTGTGGAGGCGATGAGGAAGCTTGGGAGAGTGGGAGTTAAGACGGGGAGAGCTGGAGAGATAAGGAGAGACTGTAGTGCCTTCAATTGA 927 51.13 MGIFVRKGEGQLVENFYKSTCPNVEQIVRQAVQNKFSQTTITIPATLRLFFHDCFVEGCDASVMISSPSGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACLGRVSCADILALAARDAVVLAGGPNFNVELGRRDGLISKASRVDRNLPSPNFNLNALTSMFARHGLSQTDMIALSGAHTIGASHCNRFFNRLFSASDVDPLLNPAYAEQLKQACPRNVDPSVVVKLDPTTPDTFDNVYYQNLMNGKGLFRSDEVLFTSSASKGTVVRFANNGGQFNTAFVEAMRKLGRVGVKTGRAGEIRRDCSAFN 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8032282 8036035 + CcPI632755_11g007290.1 Cco11g0729 191965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0729 308 CDD secretory_peroxidase 11 307 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cco11g0729 308 FunFam Peroxidase 149 287 - -
Cco11g0729 308 SUPERFAMILY Heme-dependent peroxidases 11 308 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 21 40 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 170 182 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 45 65 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 FunFam Peroxidase 15 158 - -
Cco11g0729 308 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Haem peroxidase superfamily signature 43 57 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 PANTHER - 7 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 Pfam Peroxidase 28 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 Gene3D - 15 308 - -
Cco11g0729 308 Gene3D Peroxidase, domain 2 149 287 - -
Cco11g0729 308 ProSiteProfiles Plant heme peroxidase family profile. 11 308 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0729 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 171 181 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco11g0594 Cco-Chr11:6349590 Cco11g0729 Cco-Chr11:8032282 1.90E-60 dispersed
Cco11g0729 Cco-Chr11:8032282 Cco07g0944 Cco-Chr7:21624347 3.30E-59 dispersed
Cco11g0728 Cco-Chr11:8021669 Cco11g0729 Cco-Chr11:8032282 4.80E-117 tandem
Cco11g0729 Cco-Chr11:8032282 Cco11g0730 Cco-Chr11:8065039 7.80E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0729 K00430 - csv:101213343 531.561