Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0730 ATGGGATTATTTTTTTGGAGGCGTTTAGTTTTGGCGGTGGTTGTAGTGGCGGCGACGGTGGAGAGAAGGGAGGCGCAATTAGTAGAAAATTTTTATGCCTCAAGTTGCCCAAACGTAGAGCAAATAGTTACACAATCTGTTCAATCCAAGTTTGCTCAAACCTTCGTTACCATTCCTGCAACTTTGCGACTCTTCTTCCATGACTGCTTTGTTGAGGGATGTGATGGTTCAGTGATGATTGCATCTCCGAATGGGGATGCAGAGAAAGAGGCTAAAGACAATCTTTCATTAGCAGGAGATGGATTTGACACGGTTGTTAAAGCAAAACAAGCAGTTGAAAATGTTTGTCCCGGTGTTGTCTCATGTGCTGACATCTTGGCTCTTGCAACTAGAGACGTGGTTAACTTGGCTGGAGGTCCACAATACAGCGTAGAACTTGGACGTCGAGATGGGCTAATTTCCCAAGCATCTCGAGTGTCTGGAAACCTACCAGAACCATTCTTCAATCTGGACCAACTCACCACCATGTTCGCCGCCCACAACCTTACCCTCATCGACATGATCGCCCTCTCCGGAGCTCACACCCTCGGCTTCTCCCATTGTGACCGTTTTGCCAACCGCCTTTACTCGTTTTCCCCTTCGTCTCCAGTGGACCCATCGTTAGACCCCGGCTACGCTCGACAGCTAATGGATGCTTGTCCCCAAAACGTGGATCCTAGTGTGGCCATCAACATGGACCCTATAACCCCTCAGACCTTTGACAACGTTTACTACCAGAATCTTGTTGCCGGCAAGGGGCTCTTCACTGCGGACCAGATTCTGTTTACTGAGTCAGAATCGCAGCCGACGGTTCTTAGCTTTTCCACCAATGGGGCGGAGTTTAATGCAGCATTTATTAGGGCCATGACTAAGTTGGGTCGGGTCGGAGTTAAGACGGGTAATAATGGTGAAATTCGAAGGGATTGCACTGCCTTTAATTCCTAA 984 48.27 MGLFFWRRLVLAVVVVAATVERREAQLVENFYASSCPNVEQIVTQSVQSKFAQTFVTIPATLRLFFHDCFVEGCDGSVMIASPNGDAEKEAKDNLSLAGDGFDTVVKAKQAVENVCPGVVSCADILALATRDVVNLAGGPQYSVELGRRDGLISQASRVSGNLPEPFFNLDQLTTMFAAHNLTLIDMIALSGAHTLGFSHCDRFANRLYSFSPSSPVDPSLDPGYARQLMDACPQNVDPSVAINMDPITPQTFDNVYYQNLVAGKGLFTADQILFTESESQPTVLSFSTNGAEFNAAFIRAMTKLGRVGVKTGNNGEIRRDCTAFNS 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8065039 8066887 + CcPI632755_11g007300.1 Cco11g0730 191966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0730 327 Gene3D - 30 326 - -
Cco11g0730 327 FunFam Peroxidase 30 171 - -
Cco11g0730 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cco11g0730 327 Pfam Peroxidase 43 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 Gene3D Peroxidase, domain 2 164 305 - -
Cco11g0730 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 FunFam Peroxidase 164 305 - -
Cco11g0730 327 PANTHER - 11 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco11g0730 327 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g1876 Cco-Chr6:28979069 Cco11g0730 Cco-Chr11:8065039 8.20E-72 dispersed
Cco09g2080 Cco-Chr9:35195624 Cco11g0730 Cco-Chr11:8065039 3.80E-74 dispersed
Cco10g1444 Cco-Chr10:27562999 Cco11g0730 Cco-Chr11:8065039 1.10E-71 dispersed
Cco11g0728 Cco-Chr11:8021669 Cco11g0730 Cco-Chr11:8065039 2.40E-124 dispersed
Cco11g0730 Cco-Chr11:8065039 Cco07g0944 Cco-Chr7:21624347 1.40E-60 dispersed
Cco11g0729 Cco-Chr11:8032282 Cco11g0730 Cco-Chr11:8065039 7.80E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0730 K00430 - csv:101213580 570.081