Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0731 ATGGGTCGGTGGAATGAGAAACTTGTAGCCTTTATTAACAATAGATGGTTAGTTTTTGTGGCTGCAATATGGCTTCAATCATGCGCTGGAATTGGGTATCTTTTTGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAATCAGAGGCAAATTGCACGTCTCGGTGTCGCGAAAGACCTTGGCGACAGCGTCGGCATTTTGGCCGCAACCTTGTCGGAGATACTGCCCTTCTGGGGAACTCTCTTGGTCGGTGCTATCCATAACTTTGTTGGGTATGGTTGGATTTGGCTCATCGTGTCTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTATGGGAACGAATGGGGAGACGTACTTCAATACAGTTTCACTGGTTTCTTGCGTACAAAACTTTCCGAAAAGTAGGGGCCCTGTGGTTGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCAATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGTGTGATGTTTTTAATCAGACCTGTTGCCGGTCATAGACAAGTAAGGCCGTCCGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCTTATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCCCCACTGTGATAGCCATTTTTACTGCAGTTATGTTTGTCATCCTTCTTACGCCCTTTTTGATTCCGGTGACATTGACTTTTAGCTCGGAGACGACAACATATGCTGAGCAAGAGGCTCTCCTACCACCGTCAGAGAAACAGGAACCTGCTAGAACTGAACCAGATGGTAATGAAGTGATATTTAGTGAGGTGGAAGACGAAAAATCAGAGGGAGAGGACTTACTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAATTGCAAGCGAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTCAAGAGGAGGAAGGGTCCACGTAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTTCCTCCCATCTCCTTGGTTCTGGAACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTATGATAATACACATATTTTCGTATCCCTGATCAGCATATGGAACTTTCTCGGCCGTGTTGGTGGTGGATACCTCTCTGAGATTGTTGTGAGAGATTTTGCTTATCCAAGACCCATTGCAATGACGATTGCACAATTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCTGGGGCAATGTACATTGGTACTCTCATAACGGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTATACAACTTCATCACTCTCTCAACTCCTGTAGGATCGCTGATATTTTCTGGCTTAATCGCAAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCTCATAATCACATCTCACAGCTGCAGAGCTCCTCGTCATTTTGGTTCACTAGACTCTACGCCGATGGACCGCACAAGTGCGAGGGTGCTATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCGATTGCAGGCATGTTAAGTTTAATCTTGGTGTATCGGACGAGGGGTGTTTACTACAACCTCTATGGAAAATCTCGTACATCAACGCTTTCGTAG 1791 45.34 MGRWNEKLVAFINNRWLVFVAAIWLQSCAGIGYLFGSISPVIKTNLSYNQRQIARLGVAKDLGDSVGILAATLSEILPFWGTLLVGAIHNFVGYGWIWLIVSGRAPVLPLWAMCVLVFMGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSANLIFMIAVGPALVAIGVMFLIRPVAGHRQVRPSDGMSFTSVYGVCLLLAAYLMGVMLVEDLVTLSPTVIAIFTAVMFVILLTPFLIPVTLTFSSETTTYAEQEALLPPSEKQEPARTEPDGNEVIFSEVEDEKSEGEDLLPASERQKRIAQLQAKLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFSSHLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYLSEIVVRDFAYPRPIAMTIAQFLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFITLSTPVGSLIFSGLIASSIYDSEAEKQAHNHISQLQSSSSFWFTRLYADGPHKCEGAICFFLTCMIMAGFCAIAGMLSLILVYRTRGVYYNLYGKSRTSTLS 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8081080 8083713 - CcPI632755_11g007310.1 Cco11g0731 191967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0731 596 CDD MFS_Mch1p_like 15 568 - -
Cco11g0731 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 586 - GO:0016020(PANTHER)
Cco11g0731 596 SUPERFAMILY MFS general substrate transporter 10 202 IPR036259 -
Cco11g0731 596 Coils Coil 316 336 - -
Cco11g0731 596 MobiDBLite consensus disorder prediction 278 297 - -
Cco11g0731 596 Gene3D MFS general substrate transporter like domains 364 581 IPR036259 -
Cco11g0731 596 SUPERFAMILY MFS general substrate transporter 212 582 IPR036259 -
Cco11g0731 596 Pfam Nodulin-like 15 262 IPR010658 -
Cco11g0731 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1312 Cco-Chr7:27216412 Cco11g0731 Cco-Chr11:8081080 3.20E-92 dispersed
Cco10g1983 Cco-Chr10:33350382 Cco11g0731 Cco-Chr11:8081080 6.90E-82 dispersed
Cco10g1986 Cco-Chr10:33376859 Cco11g0731 Cco-Chr11:8081080 5.90E-46 dispersed
Cco11g0731 Cco-Chr11:8081080 Cco02g1280 Cco-Chr2:24409518 3.60E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0731 - - - 0.0