Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g0907 ATGGGAATTATTAGTTTGGGAGAAGAATGTTACATGATGAGTTTAAGAAGTGGAGTAGTGTTGGGAATGATAACGTGGTTGGTTTGGACATGGATCATTGTTCATAGATGGAACCAAAGGAAGAAGACGACAGGTCCTAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTTTTAAATTACCACAGAATGCATGATTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTGGTTCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCCAATGTTCAGCATATTCTCAAGACCAACTTTGCTAATTATCCTAAGGGTGATGTGTATCATTCATATATGGAAGTGCTTCTTGGAGATGGGATATTCAACGTAGATGGAGAGCTGTGGAGAAAACAAAGGAAAACTGCGAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTCAGAGAGTACACTCTGAAACTATCAAATATTTTAACAAGGGCCTCTTTAGACAACCAACAAATTGACATGCAGGAATTGTTGATGAGAATGACCTTAGACTCGATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCATTGGCTCCAAATTTGCCAGAAAATGGGTTTGCTAAGGCGTTTGACACAGCCAACATGATCGTCACCCTTCGTTTCATCGATCCTTTATGGAAAATTAAAAGATTTCTGAATTTGGGATCTGAAGCTCTTCTTGATAGGTCCATCAAAATCATAGATGATTTCACCTACTCTGTCATTGCCACTAGGAAAAAAGAGATGCAACAACAACCTCAAACCACATCCAAAGATGCCAATAAGGAGAAAAAACATGACATATTGTCAAGGTTCATTGAGTTAGGCGAAGACCCAAACAACAATTTCACAAACAAAAGCTTAAGAGATGTTGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTCACAAACTTTACTCAGAGCTCAAGAATTTCGAAGAAGAAAGAGCCAAAGAAGAAAACATTTCATTGCTTCAATATCAACCAACTGATCTTCAATCCTTTGAGAGAAGAGTAATGCAATTTTCACAAATCCTCAATTATGATTCCCTTGCTCGATTACACTATTTGCATGCTACCATCACTGAGACACTTCGTCTTTACCCTGCAGTCCCTCAGGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGTACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTGTGATGCAACTTCATTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAGTGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATTTGCATGGGAAAGGACTCAGCATATCTACAGATGAAAATGGCTCTTGCCATTTTATGCAGATTCTACAAATTTAGTTTGAGGAAAGAGAGTTGCATTCCAGACGACATCAAAGAAGCCCAGGATAAGGGAAACTGCAGGCGACTAGCGACGATGAGGGAAATTTCTCCACAATTTTTTAACCTAAACCGTCATAGGGCGCCATTAGGTTGA 1665 39.94 MGIISLGEECYMMSLRSGVVLGMITWLVWTWIIVHRWNQRKKTTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYTLKLSNILTRASLDNQQIDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPLWKIKRFLNLGSEALLDRSIKIIDDFTYSVIATRKKEMQQQPQTTSKDANKEKKHDILSRFIELGEDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVAHKLYSELKNFEEERAKEENISLLQYQPTDLQSFERRVMQFSQILNYDSLARLHYLHATITETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGCDATSFNPERWLKQGIFHSESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLRKESCIPDDIKEAQDKGNCRRLATMREISPQFFNLNRHRAPLG 554
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 12415077 12426599 + CcPI632755_11g009070.1 Cco11g0907 192143
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco11g0907 554 CDD CYP86A 77 509 - -
Cco11g0907 554 Gene3D Cytochrome P450 29 531 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 FunFam Alkane hydroxylase MAH1 38 522 - -
Cco11g0907 554 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 Pfam Cytochrome P450 378 519 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 Pfam Cytochrome P450 45 359 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 SUPERFAMILY Cytochrome P450 35 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g0907 554 PANTHER CYTOCHROME P450 30 513 - -
Cco11g0907 554 Coils Coil 342 362 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g0244 Cco-Chr5:1908927 Cco11g0907 Cco-Chr11:12415077 7.00E-107 dispersed
Cco05g0248 Cco-Chr5:1963939 Cco11g0907 Cco-Chr11:12415077 1.50E-104 dispersed
Cco10g1193 Cco-Chr10:24577506 Cco11g0907 Cco-Chr11:12415077 1.60E-85 dispersed
Cco10g1902 Cco-Chr10:32577676 Cco11g0907 Cco-Chr11:12415077 1.40E-75 dispersed
Cco11g0907 Cco-Chr11:12415077 Cco04g1470 Cco-Chr4:30145027 1.50E-14 dispersed
Cco11g0907 Cco-Chr11:12415077 Cco06g0370 Cco-Chr6:4134889 1.00E-95 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g0907 K20495 - csv:101222076 879.396