Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1167 ATGTCTCCACTTGCTTTCGGAGTCACAATCTTCATTGTTCCTCTCTTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCCTTGTGCAAGAGATTTGGCTCCATATTCCTCTTAAAGCTCGGCTCCAAGAACCTCGTTGTTGTGTCTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAAGGTGTCGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGATATCTTCACTGGAAATGGTCAAGATATGGTGTTTACCGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTTACAAACAAAGTGGTGCACAGCTACAGTGACATGTGGGAAGATGAGATGGACTCTGTGGTTCGTGACCTTAAGAGTAACAAGAAGTTTCAATCAGAAGGGATAGTCATTAGAAAGCGTTTGCAATTGATGTTGTACAATATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGACGATCCTTTGTTCATTGAAGCAACCCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAGTACAACTACGGAGATTTCATTCCTTTGCTCAGACCCTTCTTGCAAGGTTACTTGAACAAGTGTAGAGATTTGCAGAGTAGGAGGTTGAACTTTTTCAACAAAAACTATGTTGAGAAAAGAAGGAAGATAATGGCTGCGAATGGAGATAAGCACAAGATGAATTGCGCCATGGATCATATTATAGACGCTCAATTGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATCGTGGAGAACATCAACGTGGCTGCTATCGAAACGACATTGTGGTCGATGGAATGGGCGATAGCTGAGCTGGTGAATCATCCAAAAATCCAACACAAGATTCGGGAGGAGATTAGTAATGTCCTAAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAACTACCATACTTGCAAGCAACAGTAAAAGAAACACTAAGGTTGCACACTCCAATTCCATTGTTGGTGCCACATATGAACTTGGAAGAGGCAAAGCTGGGAGGGTACACCATTCCAAAGGAATCTAAGGTGGTAGTGAATGCATGGTGGCTGGCTAATAACCCTGAGTGGTGGAAAAATCCAGAGGAGTTCAGGCCAGAGAGGTTCTTTGAAGAAGAAAGTGGAATAGAGGCTGTTGCTGCAGGAAAAGTGGATTATCGTTTCTTACCATTTGGAGTTGGAAGAAGGAGTTGCCCTGGAATTGTTTTGGCAATGCCAATCTTAGGACTCATTGTTGCCAAGTTGGTTTCAAAATTTGAAATGAAACCTCCTAATGGATTGGAGAAGATTGATGTCGCAGAAAAAGGAGGACAATTCACCACGCCGCCTCAGTCAGACATTTGTAGGTTGCCGTCGATCAAGCCACGAGTTGGATTGAGTCGTCCACGTCGCTATCAGTGTACAAGACAAAAAACTTGTGAATTCTCTGCCATTCGCCACCGTCTGCGTGTAGACCTCGTCACTGTCATGCGAATCTTGTTTTCTCTTGGATTTGACCGCCGATTGTCACGCGTTGAGGTTCAAGCTTTGGTCGCTGCTCATCGTAGCCCACCGTCGTTGTGA 1701 44.21 MSPLAFGVTIFIVPLFTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHSYSDMWEDEMDSVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLQGYLNKCRDLQSRRLNFFNKNYVEKRRKIMAANGDKHKMNCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPKIQHKIREEISNVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGIEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPNGLEKIDVAEKGGQFTTPPQSDICRLPSIKPRVGLSRPRRYQCTRQKTCEFSAIRHRLRVDLVTVMRILFSLGFDRRLSRVEVQALVAAHRSPPSL 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22774163 22776577 + CcPI632755_11g011670.1 Cco11g1167 192403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1167 566 SUPERFAMILY Cytochrome P450 30 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 11 487 - GO:0004497(PANTHER)
Cco11g1167 566 Pfam Cytochrome P450 30 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco11g1167 566 FunFam Trans-cinnamate 4-monooxygenase 20 490 - -
Cco11g1167 566 Gene3D Cytochrome P450 24 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1167 566 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco11g1167 Cco-Chr11:22774163 Cco11g1170 Cco-Chr11:22798840 1.70E-242 dispersed
Cco11g1167 Cco-Chr11:22774163 Cco11g1168 Cco-Chr11:22784133 5.90E-280 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1167 K00487 - csv:105434566 938.332