Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco11g1214 | ATGATCTTGTGGATTTCTGAAAGTACCTTCTTGACATTGGAGACAATGGTGGTGCATTTCCAGCACACTTTTCTTGTGTTCTTGGCGATTCTTGTTGTTGGGAAGGCAGAAATTTACATTGTCACCATTGAAGGAGAACCTATTGTAAGTTACAAAGGTGATCTGGATGGGTTTGAAGCTACAGCAATGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTTTGCTCGTCACCTCGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCTGTTGACATCACACATGAACAGGCAGAGATTCTAAGACATACACCAATTGTAAAATCTGTCGAGAGGGACTGGAAGGTTAGAAAACTAACAACACACACACCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATTTCTCCACACCATCCAAGTTTTGCAACATATAATACTGAACCTTTTGGGCCGTGTTTGAAGTATAAAGGGAAATGCGAAGTTGACCCTGACACTAAGAAGGATTTCTGTAATGGAAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTGATCCAGCTATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGGAAAGCAAGTGGGATGGCTCCTCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGAATATTTGGAGGATTTGTTGCTGATGTAGTCGCAGCCATTGATCAGGCTGTACATGATGGGGTCGACATTCTCAGTCTTTCAGTGGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAAGCTGGTGTGTTTGTTGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCATATAGTCCATGGATTGCAACTGTGGCAGCTGCAATTGATGACAGGAGATACAAAAATCATCTTACACTTGGCAATGGAAAAATTCTGGCTGGACTTGGGCTATCACCTGCTACACATTTAAATCGAACATACACATTGGTCGCGGCTAATGATGTTCTGTTAGATTCTTCGGTAATGAAGTACAGCCCTTCAGACTGCCAAAAGCCTGAAGTTCTAAACAAACGCTTGGTTGAAGGAAAAGTACTTCTATGTGGTTATTCATTCAGTTTTGTCGTTGGTACCGCTTCAATTAAGAAGGTCTCTCAAACAGCAAAAGCCCTTGGGGCAGCTGGGTTTGTTCTTGCTGTTGAAAACATTTCTCCGGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGAATTCTTATAACTGATGTCAGCAAGTCCATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCCAATATTAGAGATTTTAGTTTTCAGGAGGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGGACGGACGAGCCGAACTATGTTGGAGAGGGATTTGCTATGATTTCTGGAACTAGTATGGCAGCACCACATATAGCTGGTATAGCAGCCCTTGTAAAACAGAAGCATCCAAACTGGAGTCCTGCAGCCATTAAATCGGCTTTAATGACAACATCAACAACAATGGACAGAGGAGGAAGACCTCTTAAAGCACAACAATTTTCTGAAACAGAAGCCATGAAATTGGTAACTGCAACACCTTTTGATTATGGGAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCGGGGCTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTCTTGTGCACAACGGCAGGCATCAACGTTCACGAGATACATAACTATACAAACTCACCTTGCAACTTCACCATGGGACATCCCTGGAATCTCAACAGCCCATCAATCACCATCGCCCATCTCGTGGGAAGTCAAACCGTTACTCGCACAGTAACAAATGTAGCTGAAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAGTGAATCCTCCAGCAATGACTTTACGATCCGGTTCATCAAGAAAATTTTCGGTAACTCTCACAGCTCGATCACTGACAGGAACATATAGTTTCGGCCAGGTTCTATTGAAGGGCAGTAGAGGACACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA | 2496 | 43.87 | MILWISESTFLTLETMVVHFQHTFLVFLAILVVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESDEKIDPTSEIVTSFARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITHEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGISPHHPSFATYNTEPFGPCLKYKGKCEVDPDTKKDFCNGKIVGAQHFAEAAKAAGAFDPAIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVMKYSPSDCQKPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQEADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRGGRPLKAQQFSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGSQTVTRTVTNVAEEETYTITARMDPAVAIEVNPPAMTLRSGSSRKFSVTLTARSLTGTYSFGQVLLKGSRGHKVRIPVVAMGYQR | 831 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 24120027 | 24126753 | + | CcPI632755_11g012140.1 | Cco11g1214 | 192450 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco11g1214 | 831 | Gene3D | Peptidase S8/S53 domain | 170 | 701 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco11g1214 | 831 | Gene3D | - | 383 | 548 | - | - | |
Cco11g1214 | 831 | Pfam | PA domain | 413 | 507 | IPR003137 | - | |
Cco11g1214 | 831 | CDD | PA_subtilisin_like | 390 | 528 | - | - | |
Cco11g1214 | 831 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 34 | 143 | IPR037045 | - | |
Cco11g1214 | 831 | Pfam | Subtilase family | 168 | 649 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco11g1214 | 831 | SUPERFAMILY | Subtilisin-like | 143 | 692 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco11g1214 | 831 | Pfam | Peptidase inhibitor I9 | 78 | 141 | IPR010259 | - | |
Cco11g1214 | 831 | CDD | Peptidases_S8_3 | 144 | 647 | IPR034197 | - | |
Cco11g1214 | 831 | Pfam | Fibronectin type-III domain | 733 | 825 | IPR041469 | - | |
Cco11g1214 | 831 | Gene3D | - | 705 | 828 | - | - | |
Cco11g1214 | 831 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 87 | 801 | IPR045051 | - | |
Cco11g1214 | 831 | SUPERFAMILY | Protease propeptides/inhibitors | 100 | 141 | - | - | |
Cco11g1214 | 831 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 137 | 688 | - | - | |
Cco11g1214 | 831 | FunFam | Subtilisin-like protease SBT1.5 | 170 | 392 | - | - | |
Cco11g1214 | 831 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 173 | 184 | IPR023827 | - | |
Cco11g1214 | 831 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 611 | 621 | IPR023828 | - | |
Cco11g1214 | 831 | PRINTS | Subtilisin serine protease family (S8) signature | 247 | 260 | IPR015500 | - | |
Cco11g1214 | 831 | PRINTS | Subtilisin serine protease family (S8) signature | 610 | 626 | IPR015500 | - | |
Cco11g1214 | 831 | PRINTS | Subtilisin serine protease family (S8) signature | 168 | 187 | IPR015500 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g1038 | Cco-Chr1:13424511 | Cco11g1214 | Cco-Chr11:24120027 | 2.20E-160 | dispersed | |
Cco04g2337 | Cco-Chr4:36816173 | Cco11g1214 | Cco-Chr11:24120027 | 2.20E-190 | dispersed | |
Cco07g1576 | Cco-Chr7:29753633 | Cco11g1214 | Cco-Chr11:24120027 | 1.90E-06 | dispersed | |
Cco10g1903 | Cco-Chr10:32583886 | Cco11g1214 | Cco-Chr11:24120027 | 1.00E-47 | dispersed | |
Cco11g1214 | Cco-Chr11:24120027 | Cco11g1215 | Cco-Chr11:24131787 | 4.80E-12 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco11g1214 | - | - | - | 0.0 |