Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1420 ATGGCGGACGATTCCCTCGAGAAGAACATCCTCCAGAGCACCGCTCTTCTCCAGTATATTCTGGAAGCCAACGCCTACCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTTGACAAGTCCATGAGTGTGATGAATGTACCGGTGGATGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACTACTGCGCTTGCATTGCCCGCCGATGGCCAGATAACAGCAATTGATGTGGATAGACAACCATTCGAATTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCATAAGATTAATTTTGTGGAATCCCAAGCATTGGTTGCCCTCAATGACCTCCTCAACGATGGCAAAGAAGAAGAATTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTACATTAAATATCATGAGTTGCTTCTAAAATTGGTGAAGGTAGGTGGCATAATTGCCTATGATAACACTTTGTGGTTTGGATCAGTAGCACTAAACGATGACGATGTCCATGAAGATTTGAAGGAGAACAAAAGTCATATACAACGACTCAATGCTTTTCTAGTAAATGACATGCGGGTAGAGATAGCTCTCCTCTCTGTTGGAGACGGCGTCACTCTTTGCAGGCGTATCAAATAA 708 42.51 MADDSLEKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSVMNVPVDEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVDRQPFEFGLPFIRKAGVDHKINFVESQALVALNDLLNDGKEEEFDFAFVDAKKSEYIKYHELLLKLVKVGGIIAYDNTLWFGSVALNDDDVHEDLKENKSHIQRLNAFLVNDMRVEIALLSVGDGVTLCRRIK 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 26965453 26968817 - CcPI632755_11g014200.1 Cco11g1420 192656
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1420 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 234 IPR050362 GO:0008757(PANTHER)
Cco11g1420 235 Pfam O-methyltransferase 25 234 IPR002935 GO:0008171(InterPro)
Cco11g1420 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
Cco11g1420 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Cco11g1420 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1178 Cco-Chr5:10930552 Cco11g1420 Cco-Chr11:26965453 2.70E-17 dispersed
Cco07g1129 Cco-Chr7:24985467 Cco11g1420 Cco-Chr11:26965453 2.10E-36 dispersed
Cco11g1420 Cco-Chr11:26965453 Cco11g1422 Cco-Chr11:26982867 4.30E-107 dispersed
Cco11g1420 Cco-Chr11:26965453 Cco11g1421 Cco-Chr11:26973735 4.40E-120 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1420 K00588 - csv:101212121 395.586