Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1421 ATGGCCGACGATTCCCCCAAGAAGAACATCCTTCAGAGCACTGCTCTTCTCCAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTCGACAAGTCCATGAGTTTGATGAATGTACCAGCGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCGCCGATGGCCAGATAACCGCAATTGATGTGAATAGACAATCGTTCGAATTTGGTTTGCCATTTATCAAAAAAGCGGGAGTTGATCATAAGATCAATTTTGTGGAATCTCAGGCATTGGTTGCCTTGAATGACCTCCTCAATGATGGCAAAGAAGAAGATTTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTATATTAAATATCATGAGTTGCTTCTAAAACTAGTGAAGGTAGGTGGAGTAATTATCTATGATAACACTCTATGGTTTGGATCAGTGGCGCTAAGCGATGACATCGTCCATGAAAAATTGAAGGAGAACAAAAGTCATATACAACAATTCAATGCTTTTCTAGTAAATGACATGCGGGTGGAGATAGCTCTCCTCACCATTGGAGATGGTGTCACTCTTTGTAGGCGTATCAAATAA 708 41.53 MADDSPKKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSLMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRQSFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEDFDFAFVDAKKSEYIKYHELLLKLVKVGGVIIYDNTLWFGSVALSDDIVHEKLKENKSHIQQFNAFLVNDMRVEIALLTIGDGVTLCRRIK 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 26973735 26978497 - CcPI632755_11g014210.1 Cco11g1421 192657
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1421 235 CDD AdoMet_MTases 74 177 - -
Cco11g1421 235 Pfam O-methyltransferase 25 234 IPR002935 GO:0008171(InterPro)
Cco11g1421 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Cco11g1421 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
Cco11g1421 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 234 IPR050362 GO:0008757(PANTHER)
Cco11g1421 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0648 Cco-Chr2:6446750 Cco11g1421 Cco-Chr11:26973735 4.70E-64 dispersed
Cco11g1421 Cco-Chr11:26973735 Cco11g1423 Cco-Chr11:26995225 4.40E-43 dispersed
Cco11g1420 Cco-Chr11:26965453 Cco11g1421 Cco-Chr11:26973735 4.40E-120 tandem
Cco11g1421 Cco-Chr11:26973735 Cco11g1422 Cco-Chr11:26982867 9.50E-107 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1421 K00588 - csv:101212121 381.333