Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1422 ATGGCGGACCATCAGCACGAGAAGAACATCCTCCGGAGCACCGCTCTTCTCCAGTATATATTGGAAGCCAATTCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGAGAAGCCACCTTCGAGAAGTTTGACAAACACCTGAGTGTGATGAATGTACCGGCGGACGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACTACGGCGCTTGCACTGCCCGCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTAGTTTGCCATTTATCAAAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATGCCAAGCATCGGTTGTCCTCAATGACCTCCTCAACGAGGGCAAAGAAGGAGAGTATGACTTTGCATTTGTGGATGCAAACAAAGCGGAGTATATTAAATATCATGAGTTACTCTTAAAATTGGTGAAGGTAGGTGGAGTAATTGCTTATGACAACACCATGTGGTTTGGATCGGTCGCATTGAGCGACGACGTCGTCCTTGAAAATTTGAAGGAGGGTAGAAGTCGTACACGAGAACTCAATGCTTTTCTAGTTAACGACTCACCGGTAGAGATAGCTCTCCTCTCCATTGGAGATGGCTTCACCCTCTGCCGGTGTATCAAATAG 708 44.77 MADHQHEKNILRSTALLQYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVDRESFEFSLPFIKKAGVDHKINFVECQASVVLNDLLNEGKEGEYDFAFVDANKAEYIKYHELLLKLVKVGGVIAYDNTMWFGSVALSDDVVLENLKEGRSRTRELNAFLVNDSPVEIALLSIGDGFTLCRCIK 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 26982867 26987675 - CcPI632755_11g014220.1 Cco11g1422 192658
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1422 235 CDD AdoMet_MTases 74 177 - -
Cco11g1422 235 Gene3D Vaccinia Virus protein VP39 1 234 IPR029063 -
Cco11g1422 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
Cco11g1422 235 PANTHER O-METHYLTRANSFERASE-RELATED 6 233 IPR050362 GO:0008757(PANTHER)
Cco11g1422 235 Pfam O-methyltransferase 26 233 IPR002935 GO:0008171(InterPro)
Cco11g1422 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco11g1420 Cco-Chr11:26965453 Cco11g1422 Cco-Chr11:26982867 4.30E-107 dispersed
Cco11g1421 Cco-Chr11:26973735 Cco11g1422 Cco-Chr11:26982867 9.50E-107 tandem
Cco11g1422 Cco-Chr11:26982867 Cco11g1423 Cco-Chr11:26995225 2.40E-41 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1422 K00588 - csv:101212121 355.525