Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1495 ATGGCGTCCGCCATCCCTGAAAACCTAACAAGGGAGCAGTATGTTTACCTTTCGAAGCTTTCCGAGCAAGCCGAGCGCTACGAGGAAATGGTTCAGTTCATGCAGAAGCTTGTACTGAGCTCCACTCCAGCCTCGGAGCTCACTGTCGAGGAGCGCAATCTCCTTTCCGTCGCATACAAAAATGTGATCGGTTCTCTCCGCGCGGCTTGGCGTATCGTATCCTCAATTGAACAGAAGGAAGAAGGAAGGAAGAACGAAGATCACGTTGTCCTTGTCAAGGATTACAGATCCAAGGTCGAGTCCGAGCTGACCGACGTCTGCGCCAGTATTTTGAAGCTGTTGGACTCCAATCTGATACCATCCTCATCCTCTGGTGAATCTAAGGTGTTCTACTTAAAGATGAAGGGAGATTACCATAGGTACCTGGCGGAGTTTACGATCGGGGAGGAGAGGAAGTCCGCCGCCGAGGATACCATGCTAGCTTACAAGGCTGCTCAGGATATTGCAGCTGCCGATCTTGCACCAACGCATCCAATCAGGCTGGGCCTAGCACTAAATTTCTCTGTTTTTTACTTTGAGATCCTGAACCAGCCTGACAAAGCCTGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATTGCGGAATTGGACACATTAGGTGAAGAATCATACAAGGATAGCACTCTAATCATGCAGCTCTTAAGAGACAATCTCACCCTTTGGACTTCTGATACACAGGACCAGTTAGACGAGCCATAG 759 49.28 MASAIPENLTREQYVYLSKLSEQAERYEEMVQFMQKLVLSSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEDHVVLVKDYRSKVESELTDVCASILKLLDSNLIPSSSSGESKVFYLKMKGDYHRYLAEFTIGEERKSAAEDTMLAYKAAQDIAAADLAPTHPIRLGLALNFSVFYFEILNQPDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTQDQLDEP 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27783990 27787826 - CcPI632755_11g014950.1 Cco11g1495 192731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1495 252 PANTHER 14-3-3 PROTEIN 11 247 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cco11g1495 252 FunFam 14-3-3 protein epsilon 8 252 - -
Cco11g1495 252 Pfam 14-3-3 protein 18 242 IPR023410 -
Cco11g1495 252 SMART 1433_4 11 251 IPR023410 -
Cco11g1495 252 Gene3D - 2 251 IPR036815 -
Cco11g1495 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cco11g1495 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cco11g1495 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cco11g1495 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cco11g1495 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cco11g1495 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cco11g1495 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Cco11g1495 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Cco11g1495 252 Coils Coil 17 37 - -
Cco11g1495 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Cco11g1495 252 PIRSF 14-3-3 6 251 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1276 Cco-Chr8:24564769 Cco11g1495 Cco-Chr11:27783990 1.00E-101 dispersed
Cco11g1473 Cco-Chr11:27549261 Cco11g1495 Cco-Chr11:27783990 1.00E-101 dispersed
Cco11g1495 Cco-Chr11:27783990 Cco08g1338 Cco-Chr8:25263855 6.40E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1495 K06630 - csv:101206352 460.685