Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1604 ATGTTTCCGGTTGGGCCGTTACTGGTACCTCACGAATCGTCTGCGGATTGTACGGTGGGTGGGTACCATATCCCACGTGGCACGATGTTAGTGGTGAACGCGTGGGCGATTCATAACGATCCCGGATTGTGGGAGGATGTGGCGGCGTTTAAGCCGGATAGATTCTTAGAGGCGGCGGCGGGGGAAGGGGGAGATGGAATAGGGTTGAAGTATATGCCGCTTGGGGCAGGTAGGAGGGGGTGCCCTGGGGAAGGGCTAGCCATGAGAGTGATGGGCTTGGTTTTGGGCTCGTTAATTCAGTGCTTTGAATGGGAGAGAATAGGGGAAGAAATGGTAGACATGAGCGAAGGAACGGGGTTGACCATGCCAAAGGCCTGCCCTTTGCAAGCTAAGTGTAGGCCGCGCCCAATTCTCCACTGTACCATGTAA 429 55.24 MFPVGPLLVPHESSADCTVGGYHIPRGTMLVVNAWAIHNDPGLWEDVAAFKPDRFLEAAAGEGGDGIGLKYMPLGAGRRGCPGEGLAMRVMGLVLGSLIQCFEWERIGEEMVDMSEGTGLTMPKACPLQAKCRPRPILHCTM 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28886152 28886580 + CcPI632755_11g016040.1 Cco11g1604 192840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1604 142 Pfam Cytochrome P450 2 124 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1604 142 Gene3D Cytochrome P450 1 137 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1604 142 PANTHER CYTOCHROME P450 82C3-RELATED 1 135 IPR050651 -
Cco11g1604 142 PRINTS E-class P450 group I signature 33 57 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1604 142 PRINTS E-class P450 group I signature 81 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1604 142 PRINTS E-class P450 group I signature 71 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1604 142 SUPERFAMILY Cytochrome P450 1 135 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco11g1604 Cco-Chr11:28886152 Cco05g2300 Cco-Chr5:31646265 2.10E-48 dispersed
Cco11g1604 Cco-Chr11:28886152 Cco08g1815 Cco-Chr8:29216257 1.30E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1604 - - - 0.0