Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco11g1620 | ATGGGAGCTGAATCAGGGCTTGCAATGTTTTGTGGAATAATTCATAAAATAAAACCCTACTTAGCTATGATTTCCTTGCAATTTGGATATGCAGGGATGTATATTGTCACGATGCTTTGTCTTAAGAAGGGCATGAACCATTACGTTCTTGCCGTTTATCGACATGTCGTTGCCACCATTGTCATCTCTCCCTTCGCCATCGTCCTCGAAAGAAAAATAAGGCCAAAGATGACATTTCCAATCTTTGCACGAATATTGCTCCTCGGGTTTCTTGAGCCAGTGTTGGATCAAAATCTATACTATGTGGGTTTGAAACTCACTTCAGCAACATTCACTTCTGTCACCATCAATATTCTCCCTGCAGTAACCTTCATTATGGCTCTCATTTTCAGGCTAGAAAGTGTGAATTTGAAGAAGATTCGTAGCATCGCGAAGGTGGTAGGAACATTGGTGACAATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCAATCGTCGACATATTCCACGGCCATGGACGCCACGCCGCCCACCACAGCACTGAGTCCGCCGACCAGCACTGGGTCCTCGGAACCCTCATGCTTCTCGGCAGCATCGTCGGCTGGTCCGGTTTCTTCATCTTGCAATCCTTCACACTGAGGAAATACCCGGCGGAGCTGTCGTTGACCGCCCTGATATGCGTGGCCGGCACGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGCGTGTGGGCCATTGGCTGGGACTCTCGCCTTCTTGCCGCTGTTTATACCGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGAGTGGTGATTCGGGAACGTGGCCCAGTTTTTGTTACCTCTTTTACCCCTCTCTGCATGATTATTACCGCCGTCCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATCGGAGCTATTTTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTAAACAAATTGACAAATCAAAAAAGCGGCGCCACCACCACCGAATTACCGATCACCGCCGAGCCGGAAACCACCGCCACCGCCGAGCGTTGTTCTTCCAAGGCTCCACCGGCGTGA | 1125 | 48.98 | MGAESGLAMFCGIIHKIKPYLAMISLQFGYAGMYIVTMLCLKKGMNHYVLAVYRHVVATIVISPFAIVLERKIRPKMTFPIFARILLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNLKKIRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHHSTESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICVAGTVEGSIVTLIMERDFSVWAIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAVLGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHLNKLTNQKSGATTTELPITAEPETTATAERCSSKAPPA | 374 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29020257 | 29023149 | + | CcPI632755_11g016200.1 | Cco11g1620 | 192856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco11g1620 | 374 | MobiDBLite | consensus disorder prediction | 349 | 374 | - | - | |
Cco11g1620 | 374 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 250 | 333 | - | - | |
Cco11g1620 | 374 | PANTHER | WAT1-RELATED PROTEIN | 21 | 342 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Cco11g1620 | 374 | Pfam | EamA-like transporter family | 191 | 329 | IPR000620 | GO:0016020(InterPro) | |
Cco11g1620 | 374 | Pfam | EamA-like transporter family | 23 | 149 | IPR000620 | GO:0016020(InterPro) | |
Cco11g1620 | 374 | MobiDBLite | consensus disorder prediction | 349 | 367 | - | - | |
Cco11g1620 | 374 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 53 | 162 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco11g1312 | Cco-Chr11:25877024 | Cco11g1620 | Cco-Chr11:29020257 | 5.80E-55 | dispersed | |
Cco11g1620 | Cco-Chr11:29020257 | Cco11g1651 | Cco-Chr11:29376152 | 2.80E-36 | dispersed | |
Cco01g1164 | Cco-Chr1:17277539 | Cco11g1620 | Cco-Chr11:29020257 | 2.60E-57 | transposed | |
Cco02g1601 | Cco-Chr2:28650030 | Cco11g1620 | Cco-Chr11:29020257 | 4.00E-59 | transposed | |
Cco04g0696 | Cco-Chr4:21559731 | Cco11g1620 | Cco-Chr11:29020257 | 6.00E-99 | transposed | |
Cco06g0933 | Cco-Chr6:12276538 | Cco11g1620 | Cco-Chr11:29020257 | 2.00E-69 | transposed | |
Cco06g1158 | Cco-Chr6:20341212 | Cco11g1620 | Cco-Chr11:29020257 | 3.60E-52 | transposed | |
Cco11g1361 | Cco-Chr11:26446369 | Cco11g1620 | Cco-Chr11:29020257 | 3.60E-93 | transposed | |
Cco11g1620 | Cco-Chr11:29020257 | Cco08g0692 | Cco-Chr8:18357870 | 2.30E-107 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco11g1620 | - | - | - | 0.0 |