Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1635 ATGGCGGAGATAGCGGTGTTCGACGGAGAAGCGGCGGAGCTGAGGGAGAGCTATAATTCCGGCAAAACGAGAAGCTACGAATGGAGAGTGAATCAATTGAAGAATCTGTTGAAATTGGTTTGTGAAAACGAAGAAGAGATGGTTCAAACCGTTCATTCCGATCTTTATAAACCCGAATTTGAAGCCTTCGCTCATGAGATAGCTCTATTAAAAGGTTCGTGTAAATTGGCACTTAAAGAACTCAGGCGTTGGATGGCACCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCTGGAGCAATTGTTCCAGAACCTTTCGGTGTCGTCCTTATCATATCTGCTTGGAATTATCCATTCTTGTTATCTCTCGATCCAGTTGTTGGAGCAATAGCAGCTGGCAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAAGAACATCATCTTTGATGGCAAAACTTTTGGCGAAATATTTGGATACATCTGCTGTAAAAGTTGTTGAGGGTGCTGTTCCCGAAACTAATGCTTTGCTGGAGCAGAAGTGGGACAAAATATTCTACACAGGCAATGGAAGAGTGGGGCGGATAGTGATGGCAGCTGCTGCCAAGCATCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAGAAATCAATTTACAAGTTGCGAGTAGGCGGATTATAGCTGGCAAGTGGGGTTGTAACAATGGACAAGCATGCATTGCTCCTGATTATATCATAACACCGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTTAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCGTTGGAAACTAAAGATTTATCTCGCATTGTGAACGCGAAACACTTTGATCGCTTGACAAGGCTCTTAGATGATGATAAAGTTTCTGGCAAGATCGTGCATGGAGGTGAAAAGGACAAAACGAAGCTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCACTAATTATGACGGAGGAGATATTTGGTCCCCTACTTCCCATTCTCACGGTTGACAAGGTGGAGGACAGCTTCGAAATAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACTAACAACAAGAAGCTCAAGGAACGTTTCGTGGCTTGTATCTCTGCAGGGGGTGTGGCCATCAATGAAACCGCCTTACATCTGACGATTAGCACGTTACCGTTCGGAGGAGTTGGAGAGAGTGGAATGGGAGCTTACCATGGAAAGTTCTCCTTTGATGCATTTAGCCATAAGAAGGCCGTTCTTTATCGAAGTTTCGCAGGTGATGCGCCGATGAGATATCCGCCATACACAAAGGGAAAGCTCAGAATTCTCAAGGCTCTTCTTGGAGGTGGCATATTGGGACTCATTCGTGCCTTACTTGGTTGGTCTTAA 1440 44.1 MAEIAVFDGEAAELRESYNSGKTRSYEWRVNQLKNLLKLVCENEEEMVQTVHSDLYKPEFEAFAHEIALLKGSCKLALKELRRWMAPEKVKTSITTFPSSGAIVPEPFGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEISPRTSSLMAKLLAKYLDTSAVKVVEGAVPETNALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIIAGKWGCNNGQACIAPDYIITPKEFAPKLVESLKQELERFYGKNPLETKDLSRIVNAKHFDRLTRLLDDDKVSGKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEIVNSGTKPLAAYLFTNNKKLKERFVACISAGGVAINETALHLTISTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGGILGLIRALLGWS 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29176048 29182934 + CcPI632755_11g016350.1 Cco11g1635 192871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1635 479 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 416 IPR016163 GO:0016620(InterPro)
Cco11g1635 479 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 212 219 IPR029510 GO:0016491(InterPro)
Cco11g1635 479 PIRSF ALDH 2 469 IPR012394 GO:0006081(InterPro)
Cco11g1635 479 FunFam Aldehyde dehydrogenase 216 416 - -
Cco11g1635 479 CDD ALDH_F3FHI 12 438 - -
Cco11g1635 479 Pfam Aldehyde dehydrogenase family 22 436 IPR015590 GO:0016491(InterPro)
Cco11g1635 479 SUPERFAMILY ALDH-like 14 452 IPR016161 GO:0016491(InterPro)
Cco11g1635 479 PANTHER ALDEHYDE DEHYDROGENASE 11 477 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Cco11g1635 479 FunFam Aldehyde dehydrogenase 15 219 - -
Cco11g1635 479 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 434 IPR016162 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g1872 Cco-Chr6:28937996 Cco11g1635 Cco-Chr11:29176048 1.50E-38 dispersed
Cco07g0963 Cco-Chr7:22301173 Cco11g1635 Cco-Chr11:29176048 9.80E-135 dispersed
Cco11g1635 Cco-Chr11:29176048 Cco11g1636 Cco-Chr11:29186507 1.90E-231 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1635 K00128 - csv:101219329 863.988