Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco11g1651 | ATGGGACGACAATTGTCCGCCGACAAGCTCGTTCTGTTCTTGGATGCAGTACATTGGAATTACGAAGCACTACCACGAACGCTACCGCGCGTTCACCTGTGGTGTAGTGAGGCCCCACCCAGTTGTACCAGCAACCAACTCTACCGTCGACGCCGGACAGCGAGTGGGATGGCGGCAGCGGTCGGAGGAGGTAGTGGTAACGTCGGCGGTGGAGATGTGTCGAAGGCGCATGCGGCTATGGCTTTGGTGCAAGTAATCAATGGAGGTTATCATGTTATAACCAAAGTCGCCCTCAATGTTGGAATGAACCAGCTCGTCTTTTGTTTGTTCCGCGACTTGTTGGCTCTCGCGATTCTTTCCCCTGTCGCCTATGTTCGGGAGAAGCGAATTCGTTTGCCCATGACACGAGACCTCCTCATATCATTCTTCGTTCTTGGTTTAACTGGGATTTTTGGTAACCAGCTTCTCTTTCTCGTTGGACTTGGCTACACTAATCCAACTTATGCTGCTGCCATACAGCCTGCCATTCCAGTTTTTACATTCCTTTTTGCTGTTATGATGGGCACAGAGACTGTGAACTTACTCAAACTGGAAGGACAGGCAAAGGTTGGAGGTACCCTCGTTTGTGTCTCTGGTGCCATATTGATGGTTTTATTCCGTGGCCCAGCTTTGGTTGGAAGCACTGAATCTGATTTCATGTCACATAGTGAAATAAGTGCAAGGGGCCAGCCAGAGCCTGCTGGATGGTTAATGTCTAACTTTCTGGAATATGGATTGGATCATTTTCATGTTGGGGTTTTATGCTTGATAGGAAACTGTATGTGCATGGCTGCTTTCTTGGCTATCCAGGCACGAGTGTTAAAGAAGTATCCTGCTAACTTATCGGTCACAGCATATTCTTATTTATTTGGTGCTATATTGATGGTGATCACATCCTTCTTTATGACCAACGAATCCACAGACTGGAATTTGACGCAATCAGAGTTTTTTGCTGTCCTTTATGCCGGAGTTTTTGCATCTGCCATCAACTATGGACTCTTGACATGGTGCAACAAAATATTAGGACCTGCATTGGTCGCTCTTTACAATCCACTTCAACCTGCAGCATCTGCGCTGCTATCAAGAGTTTTCATAGGAAGCCCTATTTATCTTGGAAGTGTTTTGGGGGGATCTCTTATAATTGCTGGTCTTTATTTGGTTACATGGGCGTCACATAGGGAACGACAAACGACTCCGGTCTTGCTACCCCATTCAACCAGGTCCTCCGAACCACTTATTCATAAAGATGCATTGACTAACAAGTTTGCATATCAGATAGGACACATTTTCTCAGGGTCTGCCTCATCACCCAAATCTAGTTGGATTAGAACTCTGTTCTGTTCCACCCTTGAGCCAGTTGTGCCTCTAGCTTACATAAGTTCTTCAACTGGATGGTTTCTGGGTTTCCGGCCTGAGGAATGTATGATTTCAATCCACTCTGAATTGGTGCAACTCTGTAATTGCTTGAAATGCTGTGGAATTGAAGCTTGTAGTTGTACCATGAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAGGCATTGATTACACATCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCAAAACTTCCTGTCTTTCAAAATGGTTCCCACGTCATTTTCGACACAATCGAGATAATTCAGTACATAGAGAGAATTGCAGTTGTCTCCTCAGGGATCGATGACATAATGCCGAGTAGCAGAGAAGTCATTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATTTTTCACTCTTGCCCACATACCTGAGAAGTACCGCCTTACTGTCACCAGATTTATAAGGCGGGTGGTGATCGCTCGGATGGCCGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTTAGAGAAGCATACGAAACTGAAGACAAATTGAAAAACAAAACTGTTGTCAAACAAAGCACTGAACATCTAGTTAGACTTCTTGATGAAATCGAATCGAAACTAGGCGAAACTTCTTACTTGGCAGGGGAAGAGTTTACCATGGCTGATGCCGTGTTCATTCCAGTGCTGGCTCGAATCGTGCTGTTGAAGCTGGCAGACGAGTATATAGGCAGCAGACCGAACATTGCAGAGTATTGGATCTTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGGAAGTATTTCAATGGATGGAGAAAGCACAAAACACTTCTGAAAACGTGGTGCTTTGTTCATATCAGAACCTTGCTGAGGAGATATTGA | 2313 | 45.4 | MGRQLSADKLVLFLDAVHWNYEALPRTLPRVHLWCSEAPPSCTSNQLYRRRRTASGMAAAVGGGSGNVGGGDVSKAHAAMALVQVINGGYHVITKVALNVGMNQLVFCLFRDLLALAILSPVAYVREKRIRLPMTRDLLISFFVLGLTGIFGNQLLFLVGLGYTNPTYAAAIQPAIPVFTFLFAVMMGTETVNLLKLEGQAKVGGTLVCVSGAILMVLFRGPALVGSTESDFMSHSEISARGQPEPAGWLMSNFLEYGLDHFHVGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYLFGAILMVITSFFMTNESTDWNLTQSEFFAVLYAGVFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHRERQTTPVLLPHSTRSSEPLIHKDALTNKFAYQIGHIFSGSASSPKSSWIRTLFCSTLEPVVPLAYISSSTGWFLGFRPEECMISIHSELVQLCNCLKCCGIEACSCTMSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKINPSAKLPVFQNGSHVIFDTIEIIQYIERIAVVSSGIDDIMPSSREVIEWMHKIQEWNPKFFTLAHIPEKYRLTVTRFIRRVVIARMAETPEMAAAYHRKLREAYETEDKLKNKTVVKQSTEHLVRLLDEIESKLGETSYLAGEEFTMADAVFIPVLARIVLLKLADEYIGSRPNIAEYWILVQQRPSYKKVIGKYFNGWRKHKTLLKTWCFVHIRTLLRRY | 770 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29376152 | 29386366 | - | CcPI632755_11g016510.1 | Cco11g1651 | 192887 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco11g1651 | 770 | SUPERFAMILY | Thioredoxin-like | 512 | 577 | IPR036249 | - | |
Cco11g1651 | 770 | Pfam | Glutathione S-transferase, N-terminal domain | 512 | 577 | IPR004045 | - | |
Cco11g1651 | 770 | SUPERFAMILY | GST C-terminal domain-like | 640 | 744 | IPR036282 | - | |
Cco11g1651 | 770 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 301 | 407 | - | - | |
Cco11g1651 | 770 | Gene3D | - | 627 | 741 | - | - | |
Cco11g1651 | 770 | Pfam | Glutathione S-transferase, C-terminal domain | 666 | 727 | - | - | |
Cco11g1651 | 770 | PANTHER | GLUTATHIONE S-TRANSFERASE TCHQD | 515 | 770 | IPR044617 | GO:0004364(InterPro) | |
Cco11g1651 | 770 | SFLD | Glutathione Transferase (cytosolic) | 510 | 734 | IPR040079 | - | |
Cco11g1651 | 770 | Gene3D | Glutaredoxin | 508 | 579 | - | - | |
Cco11g1651 | 770 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 515 | 583 | IPR004045 | - | |
Cco11g1651 | 770 | CDD | GST_N_family | 515 | 576 | - | - | |
Cco11g1651 | 770 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 111 | 219 | - | - | |
Cco11g1651 | 770 | SFLD | Main (cytGST) | 510 | 734 | - | - | |
Cco11g1651 | 770 | Pfam | EamA-like transporter family | 265 | 401 | IPR000620 | GO:0016020(InterPro) | |
Cco11g1651 | 770 | Pfam | EamA-like transporter family | 78 | 199 | IPR000620 | GO:0016020(InterPro) | |
Cco11g1651 | 770 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 621 | 754 | IPR010987 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco11g1620 | Cco-Chr11:29020257 | Cco11g1651 | Cco-Chr11:29376152 | 2.80E-36 | dispersed | |
Cco11g1651 | Cco-Chr11:29376152 | Cco08g1649 | Cco-Chr8:27981629 | 1.50E-60 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco11g1651 | - | - | - | 0.0 |