Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1732 ATGGCAATGGCGGATTTCAAGCTTCATCGTCTTCTTCTTTCCTTTCTCTTTTTATTTCTTTTACTCATTCCTTCCGTAATCGCAGCAGAGGATTGTCAATGTCCTGAAGACACAGAGGAAGACACAGGGGAACGAAATGCAACTTTAGCTATGAAATACAAAGTCATCGCCATAGCTACGATTCTCGTTGCGGGAATCATCGGTGTGGTGATTCCTTTGCTTGGGAAGGTGATTCCGGCGTTAAGTCCGGAGAAGGATATTTTCTTTGTGATTAAAGCTTTTGCTGCTGGAGTTATATTAGCTACTGGATTTATTCATGTTCTTCCTGATGCTTATGAAAATCTTACGTCGTCGAAGTTGAAAGAGGATCCATGGGGGAAGTTTCCGTTCACTGGTTTAGTGGCTATGGTGGCGGCGATGGCTACTTTGATGGTGGATGCGGGTGCGAGCTCTTATTATACTCGGATTCATCTTAATAAAGCGCAGCCTGAGTTGATTGGAGATGATGAAATGCGGGGAGGCGGCGGTCATGATGGTCATGTTCATGTTCATACTCATGCCACTCATGGACATGCTCATGGCTCCGCCGATGTCGCCGGTTCATCCACCGAGATTCTCCGCCACCGTGTCATTTCTCAGGTATTGGAGCTGGGGATAGTGGTACATTCGGTAATTATAGGAATTGGTTTGGGTGTTTCTGAAACTCCGAAAACAATAAGACCTCTTGTGGCCGCCATCACTTTTCATCAGTTATTTGAAGGCATGGGCCTCGGAGGATGCATCGCTCAGGCAAAATTCAAGAACAGGGCAACAATAATAATGGGGCTTTTCTTTTGCTTGACCACACCAATTGGGATAGCAATAGGCATTGGAGTAACGAAGACTTATGATGAAGATAGCCCAAAAGCACTTATAGTGGAAGGAATTTTGAATGCGGCTTCTTCGGGTATTTTAATCTATATGGCTCTTGTAGATCTTCTTGCTGCTGATTTTATGAACCCCAGAATGCAAAGCAATGGAAAACTTCAACTTTTTGCTAACCTTTCTCTTATTCTTGGAGCTGCCTTGATGTCCTTGCTTGCTATATGGGCATAG 1095 44.29 MAMADFKLHRLLLSFLFLFLLLIPSVIAAEDCQCPEDTEEDTGERNATLAMKYKVIAIATILVAGIIGVVIPLLGKVIPALSPEKDIFFVIKAFAAGVILATGFIHVLPDAYENLTSSKLKEDPWGKFPFTGLVAMVAAMATLMVDAGASSYYTRIHLNKAQPELIGDDEMRGGGGHDGHVHVHTHATHGHAHGSADVAGSSTEILRHRVISQVLELGIVVHSVIIGIGLGVSETPKTIRPLVAAITFHQLFEGMGLGGCIAQAKFKNRATIIMGLFFCLTTPIGIAIGIGVTKTYDEDSPKALIVEGILNAASSGILIYMALVDLLAADFMNPRMQSNGKLQLFANLSLILGAALMSLLAIWA 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30172907 30174878 + CcPI632755_11g017320.1 Cco11g1732 192968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1732 364 NCBIfam ZIP zinc/iron transport family 38 364 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cco11g1732 364 PANTHER ZINC/IRON TRANSPORTER 48 363 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cco11g1732 364 Pfam ZIP Zinc transporter 52 361 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2079 Cco-Chr2:33696108 Cco11g1732 Cco-Chr11:30172907 3.80E-61 dispersed
Cco04g2098 Cco-Chr4:34889891 Cco11g1732 Cco-Chr11:30172907 9.70E-79 dispersed
Cco08g1881 Cco-Chr8:29847239 Cco11g1732 Cco-Chr11:30172907 4.20E-73 dispersed
Cco09g2484 Cco-Chr9:38974381 Cco11g1732 Cco-Chr11:30172907 1.20E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1732 K14709 - csv:101215851 574.704