Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1761 ATGTCGTCTGTGGCAGCTACGATCTCAATTTGGATAATACTTGTGGTATTATTATTATTGGGATGTAAATTTGTAAACTGGATTTGGTTGAAGCCTAAGAAATTAGAGAAGGTTTTAAGAGAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCTGCCATGAGAGAGCAGGCACTGTCCAAGCCCATGAACTTCTCCAATGATATCGCTCCACGTGTCATTCCATCTATTCATCATACCATCCAGAATTATGGCAAGAATTCATTTATGTGGCTTGGACCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTGTTTTCATTGATCAATGATTTCCAAAAGCCAACTATAAATCCCTTTGCCAGGTTGCTTGCAGATGGGATTTTAAATCATGAAGGACCAAAATGGGTCAAACACAGAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTTAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAATGGGAAAACATGGTCTCTGTAGAAGGATCTTGTGAGTTAGATGTCATGCCTTACCTACAAAATATGACTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGAAAAAAGATATTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTTTTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACTAATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAGCAATAAAGACATTGGAATGAGTATAGAAGATGTTATTGCTGAATGCAAGCTTTTCTATATTGCTGGTCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGTTGAGTTCATACTCAGAATGGCAAGAGCAAGCAAGAGCAGAGATCTTTGAGATCTTTGGTAATAAGAAACCAGATTATGATGGCTTAAGTCGACTAAAAGTTGTAACAATGATCTTCAACGAGGTTCTTAGGTTATACCCACCGGTGAGTATGTTTGGTCGTTTTGTTAAAAAAGAAACACAACTTGGAAATTTGACTTTACCAGCCGGAGTGATGTTGGCCTTACCAACTATTCTTATCCAACGTGATCCTGAGCTATGGGGAGAAGATGCAAATGAATTTAAACCAGAAAGGTTTTCTAAGGGAATTTCTAAAGCAACAAAAAATCCAAGTGCTTTTGTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAGTTGGCATTATCAATGATCCTTCAACGCTTCTCATTTGAGCTTTCGTCATCGTATACACACGCTCCCACCGTCACCATAACAACGCAACCTCAACATGGAGCTCATATCATCCTACATAAACTGTAG 1554 38.22 MSSVAATISIWIILVVLLLLGCKFVNWIWLKPKKLEKVLREQGFAGNSYRILYGDLKFRAAMREQALSKPMNFSNDIAPRVIPSIHHTIQNYGKNSFMWLGPIPRVHIMDPEQLKIVFSLINDFQKPTINPFARLLADGILNHEGPKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWENMVSVEGSCELDVMPYLQNMTADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLGVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKAGEAIQTNLLSILMESNLNEIKQHGSNKDIGMSIEDVIAECKLFYIAGQETTATLLVWTMVLLSSYSEWQEQARAEIFEIFGNKKPDYDGLSRLKVVTMIFNEVLRLYPPVSMFGRFVKKETQLGNLTLPAGVMLALPTILIQRDPELWGEDANEFKPERFSKGISKATKNPSAFVPFGWGPRICIGLNFAMIEAKLALSMILQRFSFELSSSYTHAPTVTITTQPQHGAHIILHKL 517
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 30353230 30356965 + CcPI632755_11g017610.1 Cco11g1761 192997
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1761 517 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco11g1761 517 FunFam Cytochrome P450 734A1 29 517 - -
Cco11g1761 517 CDD CYP72 82 513 - -
Cco11g1761 517 Gene3D Cytochrome P450 74 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 Pfam Cytochrome P450 88 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 SUPERFAMILY Cytochrome P450 80 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1761 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 509 IPR050665 GO:0004497(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1688 Cco-Chr3:31601885 Cco11g1761 Cco-Chr11:30353230 5.60E-101 dispersed
Cco11g0560 Cco-Chr11:5979096 Cco11g1761 Cco-Chr11:30353230 6.10E-90 dispersed
Cco11g1761 Cco-Chr11:30353230 Cco11g1763 Cco-Chr11:30369079 3.50E-279 dispersed
Cco11g1761 Cco-Chr11:30353230 Cco11g1762 Cco-Chr11:30360804 1.80E-270 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1761 - - - 0.0