Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1763 ATGTCGTCCGTAGGAGCTACGATTTCAATTTGGTTAATACTTGTGGTATTATTATTATTGGGATGGAGATTTCTAAACTGGATTTGGTTAAAGCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGCTTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCCGCCATGAGAGAGCAGGCCATGTCCAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTCTGTTCATCATACCATCCACAAATATGGCAAGAATTCATTCATGTGGCTTGGACCTATGCCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTATATTTTCAATGATCAATGATTTCCAAAAGCCAGATTCAAATCCCCTAGTCAAGTTGCTTGCAGATGGACTTGTAAATTACGAAGGACCAAAATGGGTCAAACACAGAAAGATAATCAACCCTGCATTTCATTTAGAAAAGCTTAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAATGGGAAAGTATGGTCTCCGTAGAAGGATCTTGTGAGTTGGATGTAATGCCTTATTTACAAAATATGGCTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTACGGGTTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCAAACAATAAAATGAAAGAGATCAGTAATGAGATAACAACTTTGATATTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGTAGGTGAAGCTATACAAACTGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCCGAATGCAAGCTTTTCTATATTGCTGGCCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGCTGAGTACATACTCAGAATGGCAAGAGCGAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGACTATGATGATTTAAGTCGACTAAAAGTTGTAAATATGATCTTGAATGAGGTTCTTAGGTTATACCCACCAGTGAATATGTTTGGTCGTGTTGTTAAAAAAGAAACAAAACTCGGAAATGTGACTTTACCAGCAGGAGTGATGTTGGGCTTACCAAGTATTCTCATCCAACGTGATCCTGAGTCATGGGGAAATGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAGGGAATTTCTAAAGCAACAAAAAATCCAAGTGCTTTTCTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTATCAATGATCCTACAACGCTTCTCATTTGAGCTTTCATCATCATATACACACGCTCCCACCGCCTTCTTAACAACCCAGCCTCAACATGGAGCTCATCTCATACTACACAAACTCTAG 1554 38.67 MSSVGATISIWLILVVLLLLGWRFLNWIWLKPKKLEKLLRQQGFAGNSYRILYGDLKFRAAMREQAMSKPMNFSNHIAPRVIPSVHHTIHKYGKNSFMWLGPMPRVHIMDPEQLKIIFSMINDFQKPDSNPLVKLLADGLVNYEGPKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWESMVSVEGSCELDVMPYLQNMAADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLRVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKVGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECKLFYIAGQETTATLLVWTMVLLSTYSEWQERARAEVFEIFGNKKPDYDDLSRLKVVNMILNEVLRLYPPVNMFGRVVKKETKLGNVTLPAGVMLGLPSILIQRDPESWGNDADEFKPERFSEGISKATKNPSAFLPFGWGPRICIGLNFAMIEAKMALSMILQRFSFELSSSYTHAPTAFLTTQPQHGAHLILHKL 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30369079 30375422 + CcPI632755_11g017630.1 Cco11g1763 192999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1763 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco11g1763 517 Gene3D Cytochrome P450 72 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 CDD CYP72 82 513 - -
Cco11g1763 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 Pfam Cytochrome P450 88 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco11g1763 517 FunFam Cytochrome P450 734A1 29 517 - -
Cco11g1763 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 510 IPR050665 GO:0004497(PANTHER)
Cco11g1763 517 SUPERFAMILY Cytochrome P450 79 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1689 Cco-Chr3:31606523 Cco11g1763 Cco-Chr11:30369079 2.70E-28 dispersed
Cco06g1249 Cco-Chr6:22529785 Cco11g1763 Cco-Chr11:30369079 7.90E-109 dispersed
Cco10g1506 Cco-Chr10:28251196 Cco11g1763 Cco-Chr11:30369079 5.80E-189 dispersed
Cco11g0302 Cco-Chr11:3027149 Cco11g1763 Cco-Chr11:30369079 3.00E-105 dispersed
Cco11g1761 Cco-Chr11:30353230 Cco11g1763 Cco-Chr11:30369079 3.50E-279 dispersed
Cco11g1763 Cco-Chr11:30369079 Cco03g0320 Cco-Chr3:3564714 2.50E-27 dispersed
Cco11g1762 Cco-Chr11:30360804 Cco11g1763 Cco-Chr11:30369079 4.50E-274 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1763 - - - 0.0