Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco11g1844 | ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCGGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCTATGGAAGATTATGTTGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATATTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATATTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCGCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGACGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCTAAAAACCTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA | 852 | 42.25 | MTGKEILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKNLTEEALKRKSKDDISCIVVRFH | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31126697 | 31129164 | + | CcPI632755_11g018440.1 | Cco11g1844 | 193080 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco11g1844 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
Cco11g1844 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
Cco11g1844 | 283 | FunFam | Probable protein phosphatase 2C 39 | 25 | 283 | - | - | |
Cco11g1844 | 283 | Pfam | Protein phosphatase 2C | 47 | 275 | IPR001932 | - | |
Cco11g1844 | 283 | PANTHER | PROTEIN PHOSPHATASE | 31 | 280 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cco11g1844 | 283 | SUPERFAMILY | PP2C-like | 31 | 283 | IPR036457 | - | |
Cco11g1844 | 283 | CDD | PP2Cc | 43 | 282 | IPR001932 | - | |
Cco11g1844 | 283 | Gene3D | - | 16 | 283 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g2310 | Cco-Chr4:36628561 | Cco11g1844 | Cco-Chr11:31126697 | 1.80E-84 | dispersed | |
Cco10g0895 | Cco-Chr10:18857304 | Cco11g1844 | Cco-Chr11:31126697 | 4.20E-85 | dispersed | |
Cco11g0971 | Cco-Chr11:15423598 | Cco11g1844 | Cco-Chr11:31126697 | 1.30E-17 | dispersed | |
Cco11g1461 | Cco-Chr11:27421448 | Cco11g1844 | Cco-Chr11:31126697 | 2.90E-86 | dispersed | |
Cco08g0776 | Cco-Chr8:19538892 | Cco11g1844 | Cco-Chr11:31126697 | 5.90E-46 | transposed | |
Cco11g1844 | Cco-Chr11:31126697 | Cco07g0249 | Cco-Chr7:2544210 | 1.90E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco11g1844 | K17506 | - | csv:101215129 | 533.102 |