Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1866 ATGGCTGAAAATGCATCTCCAGAGGGGCGATCTCTGGCTCTGACGCCTACTTGGTCTGTTGCTTCTGTGTTGACAATTTTCGTTGCCGTTTCTTTGCTCGTAGAACGCTCCATTCATAGGCTAAGCTCTTGGCTGGGAAAAACTCATAGAAAGCCCTTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTAATGCTGCTTGGATTTATTTCTTTGCTTCTGACGGCAACATCAAGTCTGATATCAAGTACCTGCATTCCATCCAAGTTTTATGATACCTCTTTTATTCCATGCTCCCAGTCGGAGATTGATGAACAAAATGCGGATAATTCTTCATCTGAGAAGCGAAAGCTATTTACGGGTCATGAGCCCTTTGTTTCATATGAAGGACTTGAGCAATTGCATCGCTTTATCTTTGTAATGGCAGTAACTCATATATCTTATAGTTGCTTAACCATGTTGTTGGCAATTGTGAAGATCCACAGTTGGAGAGTATGGGAAAATGAAGCTCACATGGACCACCATGAATTATTCAATGATACAACGAAAGAAAAGATAATGCAGAGACAATCTACCTTTGTACAATATCACACCTCCAATCCTTTGACCAGGAATAATTTTCTTATCTGGATGACATGTTTCTTTCGGCAATTTGGGCGTTCTGTTGTTCGTTCGGACTACCTTACTCTTCGCAAAGGCTTCATCACGAATCACAACCTCTCATCAAGATATGATTTCCATAGCTACATGGTTCGTTCGATGGAAGAAGAATTCCAGAGGATAGTTGGCGTGAGCGGTCCATTATGGGGATTTGTCGTTGCTTTTTTGCTGTTTAATGTGAAAGGCTCTAACCTATATTTTTGGATTGCAACTATTCCTGTTACTCTTGTTCTTTTAGTTGGCACAAAGTTACAGCATGTCATTGCAACTTTGACGTTGGAGAATGCTGGTATAACCGGATTCTTTTCTGGAGCAAAGCTGAGGCCCCGTGATGATCTTTTCTGGTTTAAGAAGCCTGAACTCCTGTTGTCCTTGATCCATTTTGTTCTTTTCCAGAATGCTTTCGAGTTGGCTTCGTTCTTCTGGTTTTGGTGGCAATTTGGATATAGTTCTTGCTTCATTAGCAATCATCTGCTTGTCTATGTAAGGCTAATCTTGGGTTTTGCCGGACAATTTCTTTGCAGCTATAGCACCTTGCCCCTGTACGCACTGGTTACTCAGATGGGAACAAACTACAAGGCTGCCTTAATTCCTCAAAGAATAAGGGAAACAATACATGGGTGGGGTAAGTCAGCTAGAAGGAAGAGAAGGCTCCGGATATTTACTGATGATGCCACAATCCACACGGAAACAAGCACCGTGCTGTCACTTGAGGACGACGACAACCAGCATGTTGATACACCCAAAGCTCCCACTGGCTATGCCATAATTGAGATGCAGCCGCCTACTGCAGCGAATATGACAGTCTCTATTGCTAATGATGCATCACATGCGGTTAGAACTCCCCTTCTTCAACCCTCTCTGTCTCTTTCCTTACCTGTGGCTCAAAACTTCAATGCTGGAACCCCTTTAAGAAGCTCATCTATGCCGGCTCAAAACTTCAAAGTTGAAAACTCTTTAAGAAGCTCGTCTATGCCCAGATGA 1644 42.64 MAENASPEGRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSSWLGKTHRKPLFEAVEKMKEELMLLGFISLLLTATSSLISSTCIPSKFYDTSFIPCSQSEIDEQNADNSSSEKRKLFTGHEPFVSYEGLEQLHRFIFVMAVTHISYSCLTMLLAIVKIHSWRVWENEAHMDHHELFNDTTKEKIMQRQSTFVQYHTSNPLTRNNFLIWMTCFFRQFGRSVVRSDYLTLRKGFITNHNLSSRYDFHSYMVRSMEEEFQRIVGVSGPLWGFVVAFLLFNVKGSNLYFWIATIPVTLVLLVGTKLQHVIATLTLENAGITGFFSGAKLRPRDDLFWFKKPELLLSLIHFVLFQNAFELASFFWFWWQFGYSSCFISNHLLVYVRLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKSARRKRRLRIFTDDATIHTETSTVLSLEDDDNQHVDTPKAPTGYAIIEMQPPTAANMTVSIANDASHAVRTPLLQPSLSLSLPVAQNFNAGTPLRSSSMPAQNFKVENSLRSSSMPR 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31332921 31339799 - CcPI632755_11g018660.1 Cco11g1866 193102

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1866 547 MobiDBLite consensus disorder prediction 522 547 - -
Cco11g1866 547 Pfam Mlo family 9 444 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco11g1866 547 PANTHER MLO-LIKE PROTEIN 1 1 471 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1866 K08472 - - csv:101207170 1036.17
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco10g0012 Cco-Chr10:197771 Cco11g1866 Cco-Chr11:31332921 2.10E-83 dispersed
Cco10g0068 Cco-Chr10:672511 Cco11g1866 Cco-Chr11:31332921 1.70E-103 dispersed
Cco11g1866 Cco-Chr11:31332921 Cco09g2082 Cco-Chr9:35230327 2.70E-237 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g246 Blo03g00649 Blo03g01542 Bda07g00291 . . Bpe08g01029 . . . . Cma01g01204 Cma09g00875 Car01g01028 Car09g00788 Sed04g1597 Cpe06g00699 . Bhi09g03403 Tan01g0784 Cmetu04g0308 . . . . Cla11g01772 Cam11g1837 Cec11g1858 Cco11g1866 Clacu11g1998 Cmu11g1807 Cre11g2216 Cone6ag0137 Cone9ag0162 . . Lsi04g01324 Csa04g02353 Chy07g00085 . . . . . Bpe11g00487 . Bma07g01182 . . Cmo01g01256 Cmo09g00864 Cma04g00535 . Car04g00505 . . . . . . . . . . Cla05g01024 Cam05g1118 Cec05g1128 Cco05g1118 Clacu05g1109 Cmu05g1058 Cre05g1133 . . Chy06g01139 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cco09g2082 . 3 553 MLO family AT5G53760 69.6 3.8e-218 754.6
Cco11g1866 . 5 530 MLO family AT5G53760 67.4 4.0e-207 718.0
Cco05g1118 . 7 466 MLO family AT5G53760 51.3 3.1e-127 452.6
Cco09g2082 . 3 553 MLO family AT1G26700 68.3 1.8e-212 735.7
Cco11g1866 . 1 511 MLO family AT1G26700 66.7 4.1e-201 698.0
Cco03g0237 . 8 536 MLO family AT2G39200 63.9 2.1e-192 669.1
Cco05g2351 . 7 499 MLO family AT2G39200 67.7 1.4e-191 666.4
Cco02g2253 . 8 505 MLO family AT2G39200 67.1 1.5e-190 662.9
Cco02g2253 . 1 416 MLO family AT1G61560 65.9 7.7e-160 560.5
Cco03g0237 . 1 416 MLO family AT1G61560 66.3 4.7e-157 551.2
Cco05g2351 . 7 408 MLO family AT1G61560 65.2 1.6e-152 536.2
Cco04g1876 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cco04g1876 . 18 490 MLO family AT2G17430 63.4 1.8e-172 602.8
Cco10g0012 . 29 490 MLO family AT2G17430 63.4 1.6e-160 563.1
Cco08g1081 . 4 451 MLO family AT2G17430 54.4 3.1e-132 469.2
Cco04g1876 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cco10g0012 . 5 574 MLO family AT2G17480 58.6 4.5e-177 618.2
Cco08g1081 . 11 436 MLO family AT2G17480 59.5 4.7e-142 501.9
Cco02g2253 . 8 463 MLO family AT2G17480 50.3 3.3e-124 442.6
Cco08g1081 . 1 366 MLO family AT1G42560 59.6 8.7e-126 447.2
Cco04g1876 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cco10g0012 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cco06g0054 . 6 419 MLO family AT4G24250 54.2 6.0e-117 417.9
Cco02g0029 . 43 329 MLO family AT4G24250 51.8 3.8e-79 292.4
Cco04g1876 . 8 387 MLO family AT5G65970 66.8 8.1e-145 510.8
Cco10g0012 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cco08g1081 . 7 364 MLO family AT5G65970 56.9 2.5e-114 409.5
Cco02g2253 . 2 381 MLO family AT5G65970 51.8 7.4e-106 381.3
Cco03g0237 . 2 381 MLO family AT5G65970 50.7 1.4e-101 367.1
Cco08g1081 . 2 513 MLO family AT2G33670 57.6 1.2e-159 560.1
Cco04g1876 . 28 470 MLO family AT2G33670 62.3 6.7e-158 554.3
Cco10g0012 . 29 471 MLO family AT2G33670 58.7 9.7e-141 497.3
Cco05g2351 . 64 525 MLO family AT1G11310 63.9 1.7e-169 592.8
Cco03g0237 . 63 506 MLO family AT1G11310 64.9 7.5e-165 577.4
Cco02g2253 . 63 520 MLO family AT1G11310 62.7 9.2e-163 570.5
Cco06g0054 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
Cco06g0054 . 1 508 MLO family AT4G02600 72.7 2.6e-213 738.4
Cco05g1118 . 3 560 MLO family AT1G11000 67.3 9.8e-214 740.0
Cco10g0068 . 1 495 MLO family AT1G11000 51.5 1.0e-130 464.2
Cco06g0054 . 1 508 MLO family AT4G02600 72.7 2.6e-213 738.4
Cco05g2351 . 64 525 MLO family AT1G11310 63.9 1.7e-169 592.8
Cco03g0237 . 63 506 MLO family AT1G11310 64.9 7.5e-165 577.4
Cco02g2253 . 63 520 MLO family AT1G11310 62.7 9.2e-163 570.5
Cco05g1118 . 3 560 MLO family AT1G11000 67.3 9.8e-214 740.0
Cco10g0068 . 1 495 MLO family AT1G11000 51.5 1.0e-130 464.2
Cco08g1081 . 2 513 MLO family AT2G33670 57.6 1.2e-159 560.1
Cco04g1876 . 28 470 MLO family AT2G33670 62.3 6.7e-158 554.3
Cco10g0012 . 29 471 MLO family AT2G33670 58.7 9.7e-141 497.3
Cco02g2253 . 1 416 MLO family AT1G61560 65.9 7.7e-160 560.5
Cco03g0237 . 1 416 MLO family AT1G61560 66.3 4.7e-157 551.2
Cco05g2351 . 7 408 MLO family AT1G61560 65.2 1.6e-152 536.2
Cco04g1876 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cco04g1876 . 18 490 MLO family AT2G17430 63.4 1.8e-172 602.8
Cco10g0012 . 29 490 MLO family AT2G17430 63.4 1.6e-160 563.1
Cco08g1081 . 4 451 MLO family AT2G17430 54.4 3.1e-132 469.2
Cco04g1876 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cco10g0012 . 5 574 MLO family AT2G17480 58.6 4.5e-177 618.2
Cco08g1081 . 11 436 MLO family AT2G17480 59.5 4.7e-142 501.9
Cco02g2253 . 8 463 MLO family AT2G17480 50.3 3.3e-124 442.6
Cco08g1081 . 1 366 MLO family AT1G42560 59.6 8.7e-126 447.2
Cco04g1876 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cco10g0012 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cco04g1876 . 8 387 MLO family AT5G65970 66.8 8.1e-145 510.8
Cco10g0012 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cco08g1081 . 7 364 MLO family AT5G65970 56.9 2.5e-114 409.5
Cco02g2253 . 2 381 MLO family AT5G65970 51.8 7.4e-106 381.3
Cco03g0237 . 2 381 MLO family AT5G65970 50.7 1.4e-101 367.1
Cco09g2082 . 3 553 MLO family AT5G53760 69.6 3.8e-218 754.6
Cco11g1866 . 5 530 MLO family AT5G53760 67.4 4.0e-207 718.0
Cco05g1118 . 7 466 MLO family AT5G53760 51.3 3.1e-127 452.6
Cco03g0237 . 8 536 MLO family AT2G39200 63.9 2.1e-192 669.1
Cco05g2351 . 7 499 MLO family AT2G39200 67.7 1.4e-191 666.4
Cco02g2253 . 8 505 MLO family AT2G39200 67.1 1.5e-190 662.9
Cco06g0054 . 6 419 MLO family AT4G24250 54.2 6.0e-117 417.9
Cco02g0029 . 43 329 MLO family AT4G24250 51.8 3.8e-79 292.4
Cco09g2082 . 3 553 MLO family AT1G26700 68.3 1.8e-212 735.7
Cco11g1866 . 1 511 MLO family AT1G26700 66.7 4.1e-201 698.0
Cco06g0054 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001851 1 6 2 2 2 1 3 2 1 2 2 2 3 2 2 3 1 2 2 2 2 2 2 2 2 2 2 3 4 1 65