Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco11g1866 ATGGCTGAAAATGCATCTCCAGAGGGGCGATCTCTGGCTCTGACGCCTACTTGGTCTGTTGCTTCTGTGTTGACAATTTTCGTTGCCGTTTCTTTGCTCGTAGAACGCTCCATTCATAGGCTAAGCTCTTGGCTGGGAAAAACTCATAGAAAGCCCTTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTAATGCTGCTTGGATTTATTTCTTTGCTTCTGACGGCAACATCAAGTCTGATATCAAGTACCTGCATTCCATCCAAGTTTTATGATACCTCTTTTATTCCATGCTCCCAGTCGGAGATTGATGAACAAAATGCGGATAATTCTTCATCTGAGAAGCGAAAGCTATTTACGGGTCATGAGCCCTTTGTTTCATATGAAGGACTTGAGCAATTGCATCGCTTTATCTTTGTAATGGCAGTAACTCATATATCTTATAGTTGCTTAACCATGTTGTTGGCAATTGTGAAGATCCACAGTTGGAGAGTATGGGAAAATGAAGCTCACATGGACCACCATGAATTATTCAATGATACAACGAAAGAAAAGATAATGCAGAGACAATCTACCTTTGTACAATATCACACCTCCAATCCTTTGACCAGGAATAATTTTCTTATCTGGATGACATGTTTCTTTCGGCAATTTGGGCGTTCTGTTGTTCGTTCGGACTACCTTACTCTTCGCAAAGGCTTCATCACGAATCACAACCTCTCATCAAGATATGATTTCCATAGCTACATGGTTCGTTCGATGGAAGAAGAATTCCAGAGGATAGTTGGCGTGAGCGGTCCATTATGGGGATTTGTCGTTGCTTTTTTGCTGTTTAATGTGAAAGGCTCTAACCTATATTTTTGGATTGCAACTATTCCTGTTACTCTTGTTCTTTTAGTTGGCACAAAGTTACAGCATGTCATTGCAACTTTGACGTTGGAGAATGCTGGTATAACCGGATTCTTTTCTGGAGCAAAGCTGAGGCCCCGTGATGATCTTTTCTGGTTTAAGAAGCCTGAACTCCTGTTGTCCTTGATCCATTTTGTTCTTTTCCAGAATGCTTTCGAGTTGGCTTCGTTCTTCTGGTTTTGGTGGCAATTTGGATATAGTTCTTGCTTCATTAGCAATCATCTGCTTGTCTATGTAAGGCTAATCTTGGGTTTTGCCGGACAATTTCTTTGCAGCTATAGCACCTTGCCCCTGTACGCACTGGTTACTCAGATGGGAACAAACTACAAGGCTGCCTTAATTCCTCAAAGAATAAGGGAAACAATACATGGGTGGGGTAAGTCAGCTAGAAGGAAGAGAAGGCTCCGGATATTTACTGATGATGCCACAATCCACACGGAAACAAGCACCGTGCTGTCACTTGAGGACGACGACAACCAGCATGTTGATACACCCAAAGCTCCCACTGGCTATGCCATAATTGAGATGCAGCCGCCTACTGCAGCGAATATGACAGTCTCTATTGCTAATGATGCATCACATGCGGTTAGAACTCCCCTTCTTCAACCCTCTCTGTCTCTTTCCTTACCTGTGGCTCAAAACTTCAATGCTGGAACCCCTTTAAGAAGCTCATCTATGCCGGCTCAAAACTTCAAAGTTGAAAACTCTTTAAGAAGCTCGTCTATGCCCAGATGA 1644 42.64 MAENASPEGRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSSWLGKTHRKPLFEAVEKMKEELMLLGFISLLLTATSSLISSTCIPSKFYDTSFIPCSQSEIDEQNADNSSSEKRKLFTGHEPFVSYEGLEQLHRFIFVMAVTHISYSCLTMLLAIVKIHSWRVWENEAHMDHHELFNDTTKEKIMQRQSTFVQYHTSNPLTRNNFLIWMTCFFRQFGRSVVRSDYLTLRKGFITNHNLSSRYDFHSYMVRSMEEEFQRIVGVSGPLWGFVVAFLLFNVKGSNLYFWIATIPVTLVLLVGTKLQHVIATLTLENAGITGFFSGAKLRPRDDLFWFKKPELLLSLIHFVLFQNAFELASFFWFWWQFGYSSCFISNHLLVYVRLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKSARRKRRLRIFTDDATIHTETSTVLSLEDDDNQHVDTPKAPTGYAIIEMQPPTAANMTVSIANDASHAVRTPLLQPSLSLSLPVAQNFNAGTPLRSSSMPAQNFKVENSLRSSSMPR 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31332921 31339799 - CcPI632755_11g018660.1 Cco11g1866 193102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco11g1866 547 MobiDBLite consensus disorder prediction 522 547 - -
Cco11g1866 547 Pfam Mlo family 9 444 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco11g1866 547 PANTHER MLO-LIKE PROTEIN 1 1 471 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco10g0012 Cco-Chr10:197771 Cco11g1866 Cco-Chr11:31332921 2.10E-83 dispersed
Cco10g0068 Cco-Chr10:672511 Cco11g1866 Cco-Chr11:31332921 1.70E-103 dispersed
Cco11g1866 Cco-Chr11:31332921 Cco09g2082 Cco-Chr9:35230327 2.70E-237 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco11g1866 K08472 - csv:101207170 1036.17