Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0020 ATGCCATCGGATCCGAACAAGACGTTCCCTCTTCACCTTTTTTCAATCTTGATAAATGGCTTCGGATCCGAAGATTGCTGGCTTGTAATCTCTGGAAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCTACGAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATTGGAGAAATTGATCCTTCAACAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACGCAGCATAACCCAGATAAGACACCCGAGTTTGTGATTAAGATCTTGCAGTTTTTGGTTCCCATATTGATTTTGGGTTTGGCGTTTGCTGTTCGACACTACACCAAGAATGAATAA 417 41.01 MPSDPNKTFPLHLFSILINGFGSEDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQHNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE 138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 162483 164457 - CePI673135_01g000200.1 Cec01g0020 193237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0020 138 PANTHER CYTOCHROME B5 23 136 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cec01g0020 138 Pfam Cytochrome b5-like Heme/Steroid binding domain 22 84 IPR001199 -
Cec01g0020 138 SMART Cyt_b5_2 9 85 IPR001199 -
Cec01g0020 138 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 40 47 IPR018506 GO:0020037(InterPro)
Cec01g0020 138 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 24 85 IPR001199 -
Cec01g0020 138 FunFam Cytochrome b5 type B 19 89 - -
Cec01g0020 138 Gene3D - 19 90 IPR036400 -
Cec01g0020 138 PRINTS Cytochrome B5 signature 44 58 IPR001199 -
Cec01g0020 138 PRINTS Cytochrome B5 signature 34 44 IPR001199 -
Cec01g0020 138 PRINTS Cytochrome B5 signature 72 84 IPR001199 -
Cec01g0020 138 PRINTS Cytochrome B5 signature 59 66 IPR001199 -
Cec01g0020 138 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 22 91 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0020 Cec-Chr1:162483 Cec05g0388 Cec-Chr5:3177022 1.90E-46 dispersed
Cec01g0020 Cec-Chr1:162483 Cec05g0063 Cec-Chr5:665533 8.40E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0020 K23490 - csv:101207109 241.506