Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0100 ATGAAGGGTGTAATCTCAGTTTTTCCAAATCGAAAAGCACAACTCCACACAACAAGATCGTGGGATTTCATTGGATTATCTGAACAAGTTAGTCGAGTTCCATCTGTGGAAAGTGATATCATTGTGGGAGTAATCGACACCGGGATTTGGCCGGAATCCCCTAGTTTCCTTGACCGTGGATATGGCCCTCCGCCGCCAAAGTGGAAGGGTTCTTGTGAAATCTCACCCCATTTCTCTTGTAACAATAAAATCATCGGAGCTCGATCATATCGTAGCAATGGTCAGTATCCAATAAACGATATCAAAGGTCCAAGGGATTCAGATGGTCATGGGACACACACGGCATCTACGGTGGCAGGCGGGTTAGTTGGGGAAGCGAGTATGCTCGGTCTTGGCTTCGGCACGGCAAGAGGAGGAGTCCCATTGGCACGTATCGCCTCCTACAAAGTATGTTGGTCTGATGGTTGCTTTGACGCTGATATACTTGCGGCATTTGATGATGCTATTGCCGATGGGGTTGACATCATATCTTTGTCTGTTGGACCAACCAATACGAGAGAATACTTTGATAACCCCTTTAGTATTGGAGCTTTCCATGCAATGAAAAAGGGAATACTAACATCAATGTCTGCCGGCAACGAGGGTCCAAGACCTTTCACTATTAGAAACTTCTCACCCTGGTCTCTATCAGTGGCAGCCAGTACTACCGATAGGAAATTTTTTACTGGTGTTCAACTTGGAGATGGAAGAAAATTCAATGGTGTAACAATCAATACATTTGATTTAAATGGAACACAATATCCATTGGTGTATGCTGGAAATATACCAAATGTCGCCGGTGGCTTTAATGGATCCATTTCCAGATTTTGCTTGGAAAACACGGTGGGCAGGGAATTGGTGAAGGGTAAAATTGCCCTTTGTGATGTTTTGGTACCACCAACAATTTTGGGTTCCATAAAAGCTGCAGTTGGAATTGTAATGCAAGATAGATCTCCAAAAGATCGCACATCCTCTTTTGCCTTGCCTGCCTCCCATCTTGACACACAACAAGGACTTCTCATTTCTTCTTATCTCAATTTAACTAGCCTTCCAACAGCTACCATCTTAAAAAGCACTGAAGGCAAGTATGAAGCAGCTCCTTTTGTTGCATCTTTCTCTTCAAGAGGTCCAAATCCATTAACCCCTAACATTCTCAAGCCAGATTTGAGTGGTCCAGGAGTTGAAATTCTTGCAGCATGGAGTCCTATGGGTTCTCCTTCAGGAGCTATTGATGACAATAGGAAACTTTTGTTTAACATAATTTCAGGAACTTCAATGGCTTGCCCACATGCTACAGCAGTTGCTGCATATGTTAAATCATTCCACCCTTCTTGGTCTCCTGCTGCACTCAAATCAGCACTTATGACAACAGCATTTCCTATAAGAGCTGAGCTTAACCCAGATGCAGAATTTGCATATGGCTCTGGCCATATAAATCCACTAGGAGCAGCAAATCCTGGATTAATCTACAATGCTTCTGAAATTGACTATATAAGATTTCTATGTGGTGAAGGTTATAACACCACTTTGCTCCAACAAATCTCTGAAGATAATTCTACATGTTCTCCCACCAATACTGACCAAGTTTTTGACCTAAACTACCCTTCATTTGCTCTTTCCACATCAATCTCAACCTCATTCACTCAAATTTACAAAAGAAGGGTCACAAATGTTGGGTCAACAAATTCTACTTATAAAGTCACAATTTTTGCTCCTTTAGGGCTTAATATTACGGTCAATCCTTCTATTCTTTCGTTCAAAGCCTTGGGAGAAGAGCTAAAATTTGAGCTTACAATTGACGGAAAAATCAGTAGTAGCATTGCATCCGCTTCCTTGGTTTGGGATGATGGTGTACACAAAGTGAGGAGTCCCATAATCGTCTTTGATGCTATTATGTTGATTAATCAATAA 1950 41.9 MKGVISVFPNRKAQLHTTRSWDFIGLSEQVSRVPSVESDIIVGVIDTGIWPESPSFLDRGYGPPPPKWKGSCEISPHFSCNNKIIGARSYRSNGQYPINDIKGPRDSDGHGTHTASTVAGGLVGEASMLGLGFGTARGGVPLARIASYKVCWSDGCFDADILAAFDDAIADGVDIISLSVGPTNTREYFDNPFSIGAFHAMKKGILTSMSAGNEGPRPFTIRNFSPWSLSVAASTTDRKFFTGVQLGDGRKFNGVTINTFDLNGTQYPLVYAGNIPNVAGGFNGSISRFCLENTVGRELVKGKIALCDVLVPPTILGSIKAAVGIVMQDRSPKDRTSSFALPASHLDTQQGLLISSYLNLTSLPTATILKSTEGKYEAAPFVASFSSRGPNPLTPNILKPDLSGPGVEILAAWSPMGSPSGAIDDNRKLLFNIISGTSMACPHATAVAAYVKSFHPSWSPAALKSALMTTAFPIRAELNPDAEFAYGSGHINPLGAANPGLIYNASEIDYIRFLCGEGYNTTLLQQISEDNSTCSPTNTDQVFDLNYPSFALSTSISTSFTQIYKRRVTNVGSTNSTYKVTIFAPLGLNITVNPSILSFKALGEELKFELTIDGKISSSIASASLVWDDGVHKVRSPIIVFDAIMLINQ 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 868562 873308 + CePI673135_01g001000.1 Cec01g0100 193317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0100 649 Pfam Subtilase family 38 487 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cec01g0100 649 ProSiteProfiles Serine proteases, subtilase domain profile. 20 497 - -
Cec01g0100 649 CDD PA_subtilisin_like 244 368 - -
Cec01g0100 649 Gene3D - 514 642 - -
Cec01g0100 649 Gene3D - 237 375 - -
Cec01g0100 649 CDD Peptidases_S8_3 14 471 IPR034197 -
Cec01g0100 649 SUPERFAMILY Subtilisin-like 15 501 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cec01g0100 649 ProSitePatterns Serine proteases, subtilase family, serine active site. 436 446 IPR023828 -
Cec01g0100 649 PRINTS Subtilisin serine protease family (S8) signature 37 56 IPR015500 -
Cec01g0100 649 PRINTS Subtilisin serine protease family (S8) signature 435 451 IPR015500 -
Cec01g0100 649 PRINTS Subtilisin serine protease family (S8) signature 106 119 IPR015500 -
Cec01g0100 649 FunFam Subtilisin-like protease SBT1.5 39 252 - -
Cec01g0100 649 Gene3D Peptidase S8/S53 domain 39 510 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cec01g0100 649 Pfam Fibronectin type-III domain 544 640 IPR041469 -
Cec01g0100 649 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 638 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0100 Cec-Chr1:868562 Cec05g2401 Cec-Chr5:35295842 5.70E-271 dispersed
Cec01g0100 Cec-Chr1:868562 Cec07g0403 Cec-Chr7:4185374 1.50E-234 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0100 - - - 0.0