Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0115 ATGCCGGAATCGGATAGTGGAACGCCGGTAGCATCGGCGCCGGCGACGCCGGGGACGCCGGGAGGGCCGTTGTTTTCCGGCCTCCGAGTGGATTCTCTATCGTACGATCGGAAGTCAATGCCGCGGTGTAAGTGCTTGCCCGTGAATGCTCCCACGTGGGGCCAACCTCACACGTGCTTCACTGACTTCCCTGCTCCTGATGTCTCTCTCACCCGCAAGCTGGGAGCAGAATTTGTGGGAACATTCATCTTGATATTTGCTGCGACGGCAGGGCCCATTGTCAACCAAAAGTACAACGGCGTCGAGACTCTGATCGGCAACGCCGCGTGCGCCGGCCTGGCGGTGATGATCGTAATTCTGTCAACGGGACACATTTCCGGCGCCCATCTGAACCCGTCGCTCACCATTGCTTTTGCGGCCCTCCGCCACTTCCCTTGGGTTCAAGTTCCGGCCTACATCGCCGCCCAGGTCTCTGCCTCCATTTGCGCCTCCTTCGCTCTCAAAGGTGTTTTCCACCCCTTCATGTCCGGTGGCGTCACCGTCCCCTCTGTCAGCACTGGCCAAGCCTTCGCTCTTGAATTTATCATCACTTTCAATCTCTTGTTTGTCGTCACTGCGGTCGCCACTGATACTCGCGCGGTTGGAGAGTTGGCTGGACTTGCGGTCGGAGCTACAGTGATGCTTAACATTCTTGTCGCTGGGCCCTCAAGCGGTGGTTCGATGAACCCAGTTCGAACTTTGGGCCCCGCCGTGGCTGCCGGAAATTACAGAGCATTATGGGTGTATCTGGTGGCGCCGACGCTAGGGGCAATACTCGGTGCCGGAACTTACACTGCCGTTAAGCTGAGAGACGACGAAGTGGATGCTCCGTCGCAGGTAAGGAGCTTCCGGCATTGA 897 58.19 MPESDSGTPVASAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGQPHTCFTDFPAPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGVETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGLAVGATVMLNILVAGPSSGGSMNPVRTLGPAVAAGNYRALWVYLVAPTLGAILGAGTYTAVKLRDDEVDAPSQVRSFRH 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 990403 995361 + CePI673135_01g001150.1 Cec01g0115 193332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0115 298 FunFam Aquaporin NIP2-1 60 292 - -
Cec01g0115 298 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Cec01g0115 298 PANTHER AQUAPORIN NIP2-1 68 284 IPR034294 -
Cec01g0115 298 Pfam Major intrinsic protein 68 277 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0115 298 SUPERFAMILY Aquaporin-like 69 286 IPR023271 -
Cec01g0115 298 Gene3D Glycerol uptake facilitator protein. 64 292 IPR023271 -
Cec01g0115 298 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0115 298 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0115 298 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0115 298 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0115 298 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0115 298 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0115 298 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0115 Cec-Chr1:990403 Cec07g1329 Cec-Chr7:28889350 1.20E-87 dispersed
Cec01g0115 Cec-Chr1:990403 Cec01g0116 Cec-Chr1:998441 3.80E-105 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0115 K09874 - csv:101212651 553.518