Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec01g0127 | ATGATGGACCCGCCGGAGCCGGAGGAGGAAGCTGCCGGTGGTTCTAATAGCGGCGGCGGGGGCGGAAGAGGAGGAGGAGAAGTTGAAAGGGAACACATGTTTGACAAAGTGGTGACTCCAAGTGATGTAGGGAAATTAAATCGGCTTGTTATTCCAAAGCAACATGCTGAGAGATTTTTCCCTTTAGATTCATCATCAAACGACAAGGGTTTACTGTTAAACTTCGAAGATCGAAACGGCAAATCATGGCGGTTCCGTTACTCTTACTGGAACAGCAGCCAAAGCTACGTTATGACCAAAGGCTGGAGTCGCTTCGTCAAGGAGAAACGCCTCGACGCCGGCGATATCGTCTCATTTCAACGTGGGGTTGGTGAAATTGGAAGAGATCGTCTTTACATTGACTGGCGTCGCCGCCCTGAACTCCCCATCCACCATCATCACCACCACCACTATCCCACCACCACCTCTCTCCGACCGAGCATCGTCGTCCCGAGCGGTGGTGCTACCACTTGGGGTCCATTAGTCTGGCAGCCACTCGGCGCAACAACAGCCGGATACCACCATCAGCCAGCTGCCGTAACACCGCGGGACCACACACACTTGTCGCAAATAAACAACAACAACAATGTGAATGGGATGTGTTGTCCGTACGGATATGGTAATGTTGAAACAACAACTTCTGGGTTAGTGTATTTGAGGACAGAATTAGGAGGAAGATCAAGAAGGGCAACTCCAAGATTAGGGGAAGAGGAATTTGAGTTGGAAATGGAAGGGAATAATAATTATCAGATGCAGCAGGAGTATTGTAGTAATGGTGGGGGTGCTTCAATGGTAATTCTACAAGGAAATTGTATGGAAGATCATAAATTAAAAACAACAAATAATAATAATAACAATAATTGTGAAGAAGATATACCAGTGAAGAAATCAAGATTGAGGCTATTTGGTGTAAACATGGAGATGGAGAGTCCAATTTCATCACCTTCTTCTGATGATTGTGATTTATTATTATCTACAAACCCCAAAACCACTACTACTACCACTCAATTCCAATTGCCTTCTTCAATTTACAAGTAA | 1077 | 45.5 | MMDPPEPEEEAAGGSNSGGGGGRGGGEVEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGEIGRDRLYIDWRRRPELPIHHHHHHHYPTTTSLRPSIVVPSGGATTWGPLVWQPLGATTAGYHHQPAAVTPRDHTHLSQINNNNNVNGMCCPYGYGNVETTTSGLVYLRTELGGRSRRATPRLGEEEFELEMEGNNNYQMQQEYCSNGGGASMVILQGNCMEDHKLKTTNNNNNNNCEEDIPVKKSRLRLFGVNMEMESPISSPSSDDCDLLLSTNPKTTTTTTQFQLPSSIYK | 358 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1163092 | 1164168 | + | CePI673135_01g001270.1 | Cec01g0127 | 193344 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec01g0127 | 358 | SUPERFAMILY | DNA-binding pseudobarrel domain | 31 | 140 | IPR015300 | - | |
Cec01g0127 | 358 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 22 | 319 | IPR044800 | GO:0003700(InterPro) | |
Cec01g0127 | 358 | FunFam | B3 domain-containing protein | 27 | 148 | - | - | |
Cec01g0127 | 358 | CDD | B3_DNA | 32 | 121 | IPR003340 | GO:0003677(InterPro) | |
Cec01g0127 | 358 | Pfam | B3 DNA binding domain | 34 | 138 | IPR003340 | GO:0003677(InterPro) | |
Cec01g0127 | 358 | Gene3D | - | 28 | 150 | IPR015300 | - | |
Cec01g0127 | 358 | ProSiteProfiles | B3 DNA-binding domain profile. | 34 | 139 | IPR003340 | GO:0003677(InterPro) | |
Cec01g0127 | 358 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Cec01g0127 | 358 | SMART | B3_2 | 34 | 139 | IPR003340 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0127 | Cec-Chr1:1163092 | Cec02g2231 | Cec-Chr2:39724274 | 9.60E-10 | dispersed | |
Cec03g0984 | Cec-Chr3:17396500 | Cec01g0127 | Cec-Chr1:1163092 | 1.10E-33 | transposed | |
Cec03g1432 | Cec-Chr3:32008120 | Cec01g0127 | Cec-Chr1:1163092 | 6.90E-24 | transposed | |
Cec05g2525 | Cec-Chr5:36260130 | Cec01g0127 | Cec-Chr1:1163092 | 3.00E-40 | transposed | |
Cec06g0239 | Cec-Chr6:2554739 | Cec01g0127 | Cec-Chr1:1163092 | 2.00E-52 | transposed | |
Cec10g1886 | Cec-Chr10:33687955 | Cec01g0127 | Cec-Chr1:1163092 | 1.00E-38 | transposed | |
Cec01g0127 | Cec-Chr1:1163092 | Cec07g0888 | Cec-Chr7:21955307 | 3.50E-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28827 | PF02362 | B3 | 5.40E-29 | CL0405 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec01g0127 | K09287 | - | csv:101211271 | 493.812 |