Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0205 ATGGAAGCTCTGTGGATTTTCAGCTTCGTTGTGGTTCTGGGGTTGGTTTTTTCGCCTATTAATGGCGACCCAGTTGAAGACAAGCGAGCTCTGCTTGATTTTGTCAAGAATCTCCCTCACTCTCGCTCTCTTAATTGGAATGCGGCTTCTCCGGTTTGTCATTACTGGACTGGTATAACTTGCAGTCAAGATGAATCTCGTGTTATAGCCGTTCGATTGCCCGGAGTTGGCTTTCACGGCCCGATTCCAGCGAATACTCTTAGCCGGCTATCGGCACTGCAAATATTGAGTCTCAGATCCAATCGTATAACGGGGGATTTCCCTTTGGATTTCTCGAATCTTAGTAACTTGTCTTATCTTTATCTTCAGTTCAACAACTTCTCTGGGCCATTGCCTTCCAATTTCTCTGTCTGGAAGAATCTCACCTTTGTGAACCTCTCTAATAATGGCTTCAATGGCCGTATTCCACATTCGCTTTCTAATCTGACAGCACTCACAGGTTTGAATCTGGCAAACAACTCTCTTTCAGGAGAAATACCTGACCTCCAAATCCCCAGATTGCAGGTTTTGGATTTGTCTAACAACAATCTGAGTGGGAGTGTGCCTAAATCTTTACAGAGATTTCCAAAGTCTGTATTTGTAGGCAATGACATATCTTTTGGAAGTTCTTTATTAAACAATCCTCCCGTACCCTCGCCGTTGCCTGTGTCGAATGAAAAGCCAAAGAATGCTGGTGGGCTTGGAGAAGCAGCATTGTTAGGAATTATAATTGCTGGTGGTATTTTGGGGCTTCTGGCATTTGGCTTTCTAATCCTTGTTTGCTTCTCAAGAAGGAAGAGGGAAGATGAATATTCTGGGGATCTTCAGAAAGGTGGAATGTCGCCTGAAAAAGTGATATCAAGGACTCAAGATGCAAACAACAGATTGGTTTTCTTTGAGGGGTGTCATTATGCATTTGACTTGGAGGATTTGTTGAGAGCTTCTGCTGAGGTCTTGGGGAAGGGAACTTTTGGTACTGCATATAAAGCAATTCTAGAGGATGCCACCACAGTTGTTGTTAAGAGGTTGAAGGATGTAAGCGCTGGGAAACGCGATTTCGAGCAGCAAATGGAGATTGTTGGCAGTATCAGGCACGAGAATGTGGTTGAATTGAAGGCTTACTATTATTCCAAAGATGAGAAGCTGATGGTTTATGATTTCTTTGGTCAGGGAAGCGTCTCGGCCATGTTACACGGTAAACGCGGAGAGGAAAAAACTCCATTAGATTGGGACACTAGACTGAGAATTGCAGTTGGTGCAGCACGAGGAATCGCCCGTGTCCATGCCGAAAATGGTGGGAAACTCGTCCATGGAAATGTGAAATCCTCAAACATCTTTCTGAACTCTCAACAGTATGGATGTGTGTCTGATCTTGGACTAGCAACTATAACAAGCTCACTCTCTCCACCTATATCCCGGGCTGCTGGTTACCGAGCCCCAGAAGTGACAGACACTCGCAAGGCGACACAAGCTTCAGATGTTTTCAGCTTCGGTGTCGTGCTCCTTGAGCTTCTAACCGGAAAGTCTCCAATTCATGCAACAGGCGGCGAAGAGATTGTTCATTTGGTTAGATGGGTTCATTCAGTTGTCCGAGAGGAGTGGACAGCTGAGGTATTTGATGTAGAGCTGATGAGATATCCCAACATAGAGGAAGAAATGGTTGAGATGTTACAAATAGCCTTATCATGTGTAGCCAGGATACCTGACCAGAGACCCAAAATGGCGGAAATTGTGAAGATGATCGAAAGTGTTCGACCAATGGAAGCCGAGAATCGACCTTCTTCCACGAACCGATCTGAAAGTTTGATGCCGCCGCAAGCTGTTGAAACAGAAAATTCAACCCCTCAGCAAAACAACAAACACGCAGGAGGATCTCAAGAGGTTCAACTCTTTTGGATTTTGGTGATGGCTTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAGGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTGTCAACATTCATTTCCCTCCAGATTATCCTTTTAAACCACCCAAGGTTGCATTCAGAACAAAAGTCTTTCATCCCAATATCAACAGCAACGGTAGCATATGCCTCGACATACTTAAGGAACAGTGGAGTCCTGCACTAACCATTTCCAAGGTGTTGCTTTCGATCTGCTCACTGCTAACGGACCCGAATCCTGATGATCCTTTGGTGCCAGAGATTGCACACATGTATAAGACTGACAGAAGCAAGTACGAGGCAACCGCCAGAAGCTGGACCCAGAAGTATGCTATGGTGGGTTTAGGTATGTTTCCCTCCAGAAAAACGCTGCCTGTTCTAAACTTGTTTAACCTGCCTAATGCCGTTAATGGAGAAACATATGGTCCATTAGTACAATGGGTTAAACGTAGTAATGTTTCGAGTGAGCCATTTGGATTGGAAAGCTTGGCTAAACACACAGGCAATGTCTTCTTGATGTTTGTGTGA 2577 45.05 MEALWIFSFVVVLGLVFSPINGDPVEDKRALLDFVKNLPHSRSLNWNAASPVCHYWTGITCSQDESRVIAVRLPGVGFHGPIPANTLSRLSALQILSLRSNRITGDFPLDFSNLSNLSYLYLQFNNFSGPLPSNFSVWKNLTFVNLSNNGFNGRIPHSLSNLTALTGLNLANNSLSGEIPDLQIPRLQVLDLSNNNLSGSVPKSLQRFPKSVFVGNDISFGSSLLNNPPVPSPLPVSNEKPKNAGGLGEAALLGIIIAGGILGLLAFGFLILVCFSRRKREDEYSGDLQKGGMSPEKVISRTQDANNRLVFFEGCHYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKDVSAGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDFFGQGSVSAMLHGKRGEEKTPLDWDTRLRIAVGAARGIARVHAENGGKLVHGNVKSSNIFLNSQQYGCVSDLGLATITSSLSPPISRAAGYRAPEVTDTRKATQASDVFSFGVVLLELLTGKSPIHATGGEEIVHLVRWVHSVVREEWTAEVFDVELMRYPNIEEEMVEMLQIALSCVARIPDQRPKMAEIVKMIESVRPMEAENRPSSTNRSESLMPPQAVETENSTPQQNNKHAGGSQEVQLFWILVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYEATARSWTQKYAMVGLGMFPSRKTLPVLNLFNLPNAVNGETYGPLVQWVKRSNVSSEPFGLESLAKHTGNVFLMFV 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1988421 2001075 - CePI673135_01g002050.1 Cec01g0205 193422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0205 858 Gene3D Ribonuclease Inhibitor 26 137 IPR032675 -
Cec01g0205 858 Pfam Protein tyrosine and serine/threonine kinase 330 593 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g0205 858 PANTHER OS05G0588300 PROTEIN 8 610 IPR050994 -
Cec01g0205 858 Gene3D Ribonuclease Inhibitor 138 226 IPR032675 -
Cec01g0205 858 FunFam pollen receptor-like kinase 1 295 400 - -
Cec01g0205 858 FunFam Ubiquitin-conjugating enzyme 28, E2 649 796 - -
Cec01g0205 858 MobiDBLite consensus disorder prediction 602 636 - -
Cec01g0205 858 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 649 795 IPR000608 -
Cec01g0205 858 Pfam Ubiquitin-conjugating enzyme 653 789 IPR000608 -
Cec01g0205 858 CDD UBCc 651 790 IPR000608 -
Cec01g0205 858 SUPERFAMILY Protein kinase-like (PK-like) 330 594 IPR011009 -
Cec01g0205 858 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 401 608 - -
Cec01g0205 858 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524(InterPro)
Cec01g0205 858 MobiDBLite consensus disorder prediction 599 636 - -
Cec01g0205 858 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515(InterPro)
Cec01g0205 858 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515(InterPro)
Cec01g0205 858 Gene3D Ubiquitin Conjugating Enzyme 646 797 IPR016135 -
Cec01g0205 858 Pfam Leucine rich repeat 82 127 IPR001611 GO:0005515(InterPro)
Cec01g0205 858 SUPERFAMILY UBC-like 644 796 IPR016135 -
Cec01g0205 858 SUPERFAMILY L domain-like 37 208 - -
Cec01g0205 858 Gene3D Phosphorylase Kinase; domain 1 293 400 - -
Cec01g0205 858 FunFam Probable inactive receptor kinase RLK902 24 183 - -
Cec01g0205 858 SMART ubc_7 652 795 - -
Cec01g0205 858 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0205 858 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 722 737 IPR023313 -
Cec01g0205 858 Gene3D Transferase(Phosphotransferase) domain 1 402 619 - -
Cec01g0205 858 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0064 Cec-Chr1:518535 Cec01g0205 Cec-Chr1:1988421 3.40E-68 dispersed
Cec01g0205 Cec-Chr1:1988421 Cec11g0278 Cec-Chr11:3025179 4.60E-135 dispersed
Cec01g0066 Cec-Chr1:528441 Cec01g0205 Cec-Chr1:1988421 1.50E-154 transposed
Cec02g0437 Cec-Chr2:4120427 Cec01g0205 Cec-Chr1:1988421 1.10E-79 transposed
Cec02g1990 Cec-Chr2:37748201 Cec01g0205 Cec-Chr1:1988421 1.60E-66 transposed
Cec02g2413 Cec-Chr2:41363051 Cec01g0205 Cec-Chr1:1988421 2.60E-25 transposed
Cec02g2522 Cec-Chr2:42266698 Cec01g0205 Cec-Chr1:1988421 1.00E-47 transposed
Cec04g0611 Cec-Chr4:24642556 Cec01g0205 Cec-Chr1:1988421 5.60E-23 transposed
Cec04g0755 Cec-Chr4:26883407 Cec01g0205 Cec-Chr1:1988421 7.60E-201 transposed
Cec05g2310 Cec-Chr5:34388144 Cec01g0205 Cec-Chr1:1988421 4.70E-24 transposed
Cec05g2686 Cec-Chr5:37432080 Cec01g0205 Cec-Chr1:1988421 1.30E-34 transposed
Cec06g0817 Cec-Chr6:10021635 Cec01g0205 Cec-Chr1:1988421 1.10E-28 transposed
Cec07g0955 Cec-Chr7:23457397 Cec01g0205 Cec-Chr1:1988421 2.80E-17 transposed
Cec07g1126 Cec-Chr7:26474371 Cec01g0205 Cec-Chr1:1988421 8.70E-37 transposed
Cec09g1034 Cec-Chr9:10029278 Cec01g0205 Cec-Chr1:1988421 1.40E-77 transposed
Cec06g2014 Cec-Chr6:33305336 Cec01g0205 Cec-Chr1:1988421 2.20E-32 transposed
Cec01g0205 Cec-Chr1:1988421 Cec05g1032 Cec-Chr5:9014177 2.60E-223 wgd
Cec01g0205 Cec-Chr1:1988421 Cec07g1592 Cec-Chr7:31442467 7.00E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71664 PF07714 PK_Tyr_Ser-Thr 2.70E-34 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0205 - - - 0.0