Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0232 ATGGCTACTAAAGAATCGAGTTCTACCACTCCCACTGAAGGCAAGATTAAAGGGGTTCTTACCCATGGTGGCCGATATGTGCAGTATAATGTTTATGGTAACTTGTTTGAGGTTTCGGCTAAGTATGTCCCTCCTTTGCGACCTATTGGTAGAGGTGCTTATGGTCTTGTTTGTGCTGCAGTAAATTCAGAGACACATGAAGAGGTTGCCATCAAGAAAATTGGAAATGCATTTGATAACATAATCGATGCCAAGAGAACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACATGAAAATATTATCGCTATCAGAGACATCATTAGGCCGCCAAAAAGAGAGGTTTTTAATGATGTGTATATTGTTTACGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCTGACCAACCACTGACAGACGATCATTGCCAGTACTTTTTGTATCAGTTGTTGCGTGGGCTGAAATATGTACATTCAGCCAAGGTCCTGCACCGTGATCTCAAGCCAAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGAGACTTTGGATTGGCAAGGACGACTTCTGAAACTGACTTCATGACTGAATATGTGGTTACTCGCTGGTACCGAGCACCAGAGTTGCTCCTCAATTGTTCAGAGTACACTGCTGCTATCGATGTTTGGTCTGTGGGATGCATACTTGGTGAGATAATGACCAGAGAACCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTCAGACTTATAACTGAGCTACTAGGATCACCAGATGATGCGAGCCTAGGATTTCTCCGAAGTGATAATGCTCGAAGATACGTCAAGCAGCTTCCACAGTACAGGAAACAACAATTCTCAGCTAGATTTCCCAACGTGTCTCCAGCTGCCCTGGATCTTCTCGAAAAGATGCTCGTATTTGATCCGAACAAACGCATTACAGTGGAGGAGGCACTTTGTCATCCATACTTGCAATCTCTTCACGACATCAATGACGAGCCGGTCTGTGCCAGGCCTTTCAATTTTGATTTTGAGCAACCGTCATGCACTGAAGAGCATATTAAAGAACTCATTTGGAAAGAATCCGTCAGGTTCAATCCTGACGAATCCGCTAGGAGGACAACTCTTTGTGTTTGA 1152 42.97 MATKESSSTTPTEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQPLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSARFPNVSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCARPFNFDFEQPSCTEEHIKELIWKESVRFNPDESARRTTLCV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2316600 2320699 + CePI673135_01g002320.1 Cec01g0232 193449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0232 383 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Cec01g0232 383 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0232 383 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0232 383 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Cec01g0232 383 FunFam Mitogen-activated protein kinase 127 356 - -
Cec01g0232 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524(InterPro)
Cec01g0232 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g0232 383 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Cec01g0232 383 CDD STKc_TEY_MAPK 36 372 - -
Cec01g0232 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 365 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec01g0232 383 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0232 383 SMART serkin_6 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0232 383 FunFam Mitogen-activated protein kinase 28 137 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0232 Cec-Chr1:2316600 Cec03g0208 Cec-Chr3:2185387 6.30E-169 dispersed
Cec07g0943 Cec-Chr7:23284865 Cec01g0232 Cec-Chr1:2316600 1.30E-116 transposed
Cec01g0232 Cec-Chr1:2316600 Cec06g0355 Cec-Chr6:4074134 5.90E-183 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71665 PF00069 Pkinase 8.30E-71 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0232 K20600 - csv:101214254 778.859