Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec01g0233 | ATGGCGACGGTGATTTCGGCCGTTGCAACCGCCGCGCCCTACCGGTTTAATTACCGGAGATTGTTTCAACGCCCTGCCGGAGCTCCGCCTCCACGGCTGGGTTTTCCGAAGCGTTTTCCATGGCGGTGCTTTGCGAAACAGAGCTCGAGAAGATTGCTGGCCATGAAGAAGAAGAAAAGTGAAGAAGATGAAGTGGTTAAGGAATTGAAGATGACTGTGCAGGAAAAAATGGCGACGAAGAAAGAGGAAAGAAATGCTTATTTGGTAGCTGCAATTGTTTTGAGCTTTGGGATCACTTCAATGGCCGCCATCGCTGTTTATTACAGATTCTCTTGGCAAATGGAGGGCAAAGAGTTTCCAATTTTGGAAATGTACGGCACTTTTGCACTATCCATCGGCGCTGCTGTGGGAATGGAATTCTGGGCGAGATGGGCTCACAAAAAGCTATGGCATGCTTTGTTATGGGATATGCACGAGTCTCATCATAGGGCGAGGGTTGGAGCTTTTGAATTGAACGATGTGTTTGCAATTATAAACGCTGTCCCAGCCATTGCTCTTCTTTCTTTTGGCTTCTTCAATCAAGGCTTCTTTCCCGGCCTCTGTTTTGGTGCCGGTTTGGGAATTACGGTGTTTGGGATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCCATAGCCGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATATCCATCACACGGATAAATTCGACGGAGTTCCGTACGGTTTGTTTTTAGGACCCAAGGAATTGGAGGAAGTGGATGGCGAAGAAGAGCTGCAGAAGGAAATTAAAAAGAGAAGCAAGGGTGGATGGCTGATTACATGA | 876 | 48.97 | MATVISAVATAAPYRFNYRRLFQRPAGAPPPRLGFPKRFPWRCFAKQSSRRLLAMKKKKSEEDEVVKELKMTVQEKMATKKEERNAYLVAAIVLSFGITSMAAIAVYYRFSWQMEGKEFPILEMYGTFALSIGAAVGMEFWARWAHKKLWHALLWDMHESHHRARVGAFELNDVFAIINAVPAIALLSFGFFNQGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFDGVPYGLFLGPKELEEVDGEEELQKEIKKRSKGGWLIT | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2323954 | 2326990 | + | CePI673135_01g002330.1 | Cec01g0233 | 193450 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec01g0233 | 291 | Coils | Coil | 66 | 86 | - | - | |
Cec01g0233 | 291 | PANTHER | BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC | 54 | 285 | IPR045019 | GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0233 | Cec-Chr1:2323954 | Cec05g1000 | Cec-Chr5:8775540 | 7.60E-90 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec01g0233 | K15746 | - | csv:101214325 | 462.996 |