Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0255 ATGCTGTGCAAAGCTGTTGATAGACCTAGCAAAGAACTTCAACAGCCATCTCCTAAAAGTTTGGTGACTGCATCATCAAAGAATCTAGATTCAACAGCATCAACAAGAGTAGCTTGCTGCAGAAGTCGAAGATTTTGTACTTGTAAAAGTTGTATGGAGTATGGCCGACATAATGAGATTAGCCTAAGATTGGTTCAGAAGAATGAAGCGGCTGAGCCATTTTCAAGTAAAAAGTTTGTTGGTGTGGCTGATAAACAGTGTAAACAATTATTAGATGCATTGGGAATTTTCAATTCAAATAAGGAATTGTTTGTAAATCTACTACAAGACCCAAATTCTCTGTTAATTAAACGTATTGAAGACTCTACTGATTCAAGGAACAGAAAACAGCAGATGATGACTTTCTTTGATAGCAGGTTGTCTGAAAACAAGATAAGAGAAGTGGGGGAATATGAGGAGCCTGACTACAGTAACAAATTGAAGCCTTGTGATAGATTACCCACTGAGGATAGCGATGATCCTCTATCCTTGGAAAGAATAGTGGTATTAAAGCCAAATCCAACTAGCTCACTACCTGCGGCTGTGGGAACCAATCATTGCCCCTCTCTGAAATCTCATTCTAGTTTCATAAAGAATGGGCAAAGTGACAAGAGAACCCTTTTTTCTTTTAGACAAATAAAGAGGAAGATGAAGCAAGCAATGAGGATAGGGAAAAAAGAGCCTGAATGCCTATCAACTAATGGTATGGCCAAGAAAACTCCACCAGTTTTTAGGGCCCCAAAAGATGATGGTAAACAGATGGTTATGGAGGCAACTGGAAGAAGTTCCTACAATAATATTCAAACAGATGATAAAATAATTTCTAGTTCATTTCAAGATTCCCTGGAAAGGGATCAACTAGACAGGGCATTTTACTCTAGAAATGGGGACAAGACGGCTTCAACCAGTGAAAGTCCTGACAAAAAGGTAGGCCAGTCAGCTGTGACAAGTAATCTCAAACGGCAGAAATCTAAGAAGCATGAAGGGGACAAAGAGTTCTCAAGAAATATGAAAGCAAAACCATGGGGGTGGGCGATGTGCTTTTCTGATGATGACATATTGCCATCAAATAAACCTGGATGTCATACTCCAAGCCATACGAGATATTCCCACCTTAGCAATAAGAAGTTCATTTACGAGAAGAAGTCAAAATCTCCGAATGACGTGGAACAAAGTTGCAAAACACCAGAAATGGTTAAAATAGGAGCTCCTTTTGGAGAGGCAAGGAGAGATGATGACCAATTGCACGCCTCAACTACAGAGTTGAATGTGTCACCCGTCATTTTTTCTGATGTCAAAGTGGATCAAGATCCAATTATTGAAGGGTCTGTGAAGTTCGTAAAAGACATTGCCACAATACACCAGGAAAGAAATAGTTTTTGTGAAGAGTCATCTAGATTTGATAATGATTGCAACACATGTTATTGTCAAAGAACCAACAAGATCAAGGGCTTTGAAGAGAAAGGAAATCCGGAGCTCTCTAAACTGAATTTGCCTTTGGAGGTTCAACCATCAGCTCTTTCAGTAGATCCATTTCCATCCAGCTCATTACAATTTCAGACAGTGGAAGATCCTAATGGTTTGTGTGATAGAGAAGTGCATCCTCTACCAGAAACTATTCATGACGACCAACTTTTGATAGATGCTACCTCTAGTAATCTTGCTTTCACCCCAGGAACAGCTGAGCCATCTAGTGAAGCACTCCCCATTAATTTTGAAAAGGACCAGTGTACTGGTTTGGCAAGGTTGCAAGAGGTTCTCAATCCCGCCATCGCTTCCAACTGCTGTAGCTCCATCTCTCAGTGTGTACTTGAGCTGCTGCAAGTCTCAAAACAGAATTGGAATGAATTGTCATTGGATTGTCATTCTTCAACTTGGCTGCAGATATCATTTGTTGACAAAGTGAAGATATTTAGTAGCCAGTTATGTGGTGATTGTGTGCTTCTTTTCGACTATTTTAATGAAGTCCTTGAGGATGTTTTCCACTGTTATATTAGATGCTCCCCATGGTTATCATCTTATAAGGCACACATTCAAGCACCTGATAAGGTAAGCGCTTTCTATCATGAGGTTATCCAACATGTGGATTGGTCACTTCTGCAGCAGCAGCCACCACAAACACTGGACCAACTTTGTTTAAGAGACTTGGGATCTAGAAAGTGGATCAATTATCCAACTGAAACTGAAGAGCTCGTTAACATTGTAGCAGAATCGGTTTTAAGAGAATTAATCATTGAAAGTGTTGTTTACCTTGGTGTAGATGCTCTCACACAACTCCAAATGTTGTCTGAAGATGAACAGTTGGAACTCAACACACAGCTGAAACAACTCAACAAAGCTGCAATCAAGAGTTTCAAGACAGAATTTGGTGATATTATAGATTGTGTTGACATCTACAAACAACCTTCTCTTGATCATCCTTTGCTCAAAAACCATGCAATCCAGATGAAGCCAACAACATTCCCGAAAGGGCTGATAGGCGATACATCAAAAGTCGAGAGGCTGCTGCAGGATCTTCCAAACATTAACAGCTGCCCACCAGGATTAGTGCCAATCAGAAGGACTACAAGGGAAGATCTGATAGCAGCAAGAAGTTTCAAGCCTTTGTGGTCAGATCAAGCAACAGATAATCTCCGGCCAATCACTACGATTGACGCCGCCGGTTATCATCTTGCAACACTCAACTATAGGGCCAAAGTCTATGGAGCAAAATCACAAATCAATGTATGGAACCCAATTCCATCAGTGGATCAATATAGTTCTGCTAGTATGTGGCTATCTCAAGGCTTTAGAGATCAACAGAACACCATACAAGTTGGTTGGGGAGCTGATGGTTACCAAAACACTGGATGCTACGACCAACTATGTCGAGGTTTCATACAAATCGATTCGAGGATCACACCCGGCATGCCTATAAGACCAATTTCTACCTACAACGGACCCCAATACGGAATTCCAGTCAGCCTTCACCAGGATGCGAGCACGGGGAACTGGTTGTTCATGCTTGGAGACAAATACATTGGGTACTGGCCAAAGGGACTGCTGCCAGGCATGGAAAATGGAGCAACTACTGCAGCATGGGGAGGCGAAATTTACAGGCCTACAACAGAAGCAGGGCCAGCCATGGGGAGTGGCCATTTTCCTGAAGAGGGTTTCAGTAAAAGTGCTTTTGTGAATCAGATTCAAGTGGCAGAGTCTAGTATTTCAAGGGGATTTGTTGATCCAGTGGGTTCACAGCTCAGTATTGTTTTGGACAAACCTATCTGTTTTGGGCTCATTAATAAGTTTACTGAAGATGGGAACTGGGGACATCATATCTTCTTTGGAGGGCCAAGTGGCTGCAGGTGA 3387 41.6 MLCKAVDRPSKELQQPSPKSLVTASSKNLDSTASTRVACCRSRRFCTCKSCMEYGRHNEISLRLVQKNEAAEPFSSKKFVGVADKQCKQLLDALGIFNSNKELFVNLLQDPNSLLIKRIEDSTDSRNRKQQMMTFFDSRLSENKIREVGEYEEPDYSNKLKPCDRLPTEDSDDPLSLERIVVLKPNPTSSLPAAVGTNHCPSLKSHSSFIKNGQSDKRTLFSFRQIKRKMKQAMRIGKKEPECLSTNGMAKKTPPVFRAPKDDGKQMVMEATGRSSYNNIQTDDKIISSSFQDSLERDQLDRAFYSRNGDKTASTSESPDKKVGQSAVTSNLKRQKSKKHEGDKEFSRNMKAKPWGWAMCFSDDDILPSNKPGCHTPSHTRYSHLSNKKFIYEKKSKSPNDVEQSCKTPEMVKIGAPFGEARRDDDQLHASTTELNVSPVIFSDVKVDQDPIIEGSVKFVKDIATIHQERNSFCEESSRFDNDCNTCYCQRTNKIKGFEEKGNPELSKLNLPLEVQPSALSVDPFPSSSLQFQTVEDPNGLCDREVHPLPETIHDDQLLIDATSSNLAFTPGTAEPSSEALPINFEKDQCTGLARLQEVLNPAIASNCCSSISQCVLELLQVSKQNWNELSLDCHSSTWLQISFVDKVKIFSSQLCGDCVLLFDYFNEVLEDVFHCYIRCSPWLSSYKAHIQAPDKVSAFYHEVIQHVDWSLLQQQPPQTLDQLCLRDLGSRKWINYPTETEELVNIVAESVLRELIIESVVYLGVDALTQLQMLSEDEQLELNTQLKQLNKAAIKSFKTEFGDIIDCVDIYKQPSLDHPLLKNHAIQMKPTTFPKGLIGDTSKVERLLQDLPNINSCPPGLVPIRRTTREDLIAARSFKPLWSDQATDNLRPITTIDAAGYHLATLNYRAKVYGAKSQINVWNPIPSVDQYSSASMWLSQGFRDQQNTIQVGWGADGYQNTGCYDQLCRGFIQIDSRITPGMPIRPISTYNGPQYGIPVSLHQDASTGNWLFMLGDKYIGYWPKGLLPGMENGATTAAWGGEIYRPTTEAGPAMGSGHFPEEGFSKSAFVNQIQVAESSISRGFVDPVGSQLSIVLDKPICFGLINKFTEDGNWGHHIFFGGPSGCR 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2554865 2561366 + CePI673135_01g002550.1 Cec01g0255 193472

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0255 1128 Pfam Neprosin 942 1124 IPR004314 -
Cec01g0255 1128 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 19 762 - -
Cec01g0255 1128 Pfam Neprosin activation peptide 797 887 IPR025521 -
Cec01g0255 1128 MobiDBLite consensus disorder prediction 13 27 - -
Cec01g0255 1128 Pfam Protein of unknown function (DUF3741) 86 113 IPR022212 -
Cec01g0255 1128 MobiDBLite consensus disorder prediction 308 332 - -
Cec01g0255 1128 MobiDBLite consensus disorder prediction 1 27 - -
Cec01g0255 1128 MobiDBLite consensus disorder prediction 244 263 - -
Cec01g0255 1128 MobiDBLite consensus disorder prediction 306 347 - -
Cec01g0255 1128 Pfam Domain of unknown function (DUF4378) 616 759 IPR025486 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0255 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0255 Cec-Chr1:2554865 Cec09g0360 Cec-Chr9:3033763 1.10E-67 dispersed
Cec01g0255 Cec-Chr1:2554865 Cec05g0182 Cec-Chr5:1535840 2.10E-18 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g314 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g00276 Chy09g01233 . . . . . . . . . . . . . . . . . . Bhi12g00270 . . Lac11g2084 Hepe06g1539 . Lcy12g1643 Cla01g00257 Cam01g0264 Cec01g0255 Cco01g0270 Clacu01g0263 Cmu01g0252 Cre09g2257 Lsi09g00252 . . Cme09g01768
Vvi16g695 . . . . . . . . . . . . . . . . . . . . . . . . Cla01g00257 Cam01g0264 Cec01g0255 Cco01g0270 Clacu01g0263 Cmu01g0252 Cre09g2257 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007276 0 1 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 0 2 1 1 1 1 1 1 1 1 6 1 1 36