Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0410 ATGATGACCGGAGGAATGGAAGATGCGGTGGTGATCGGAGGATTGATGGCGGTGCAGTTCATTTACGCCGGAAATTCGGTATTGTTGAGTTATTTGATGTCGTTAGGGCTTAATCCGCTCACCATCGTCGTTTGTTTTGCCTCTACAACTTCTCTGTTTCTCTCTCCTCTCGCTGTTTATTTTGAAAGGAGCAAATGGCCGAAGAAATTGAGTTTTAAGTTGACGCTTCAACTTGTGCTCATCTCCTTTGGCGGAGTAACTTTGTTCCAAACTCTGCTATTAGAAGGGATAAAGTTGACCTCCCCAGCCATGGCTACTGCCATGCCAAACCTGGCTCCTGGTCTCATCTTTGTCATTGCTTGGTGTTGTAGATTGGAGAGAGTGAAACTTAGTTGTGTGTACAGCAAAGTAAAGATTTTGGGGACATTGCTTTGTGTAGTAGGTGCTCTAACAATGAGCATAATACAAAGCAGTATTACAATACCAGCAAAAGATCAACTAATAACAACATCTCAACCTACCATTGTACTCTTCAATAAGGAAAAGATTGTTGGTTGTTTGTACTTAATGCTGGCTGTCTTCATACTATCAACCAATGTTGTTTTGCAGGCAAAAGCCCTTGGTGAATTACCAGCTCCAATGTCATTGAGTGCTGTAACATCCTTCATTGGAGTGTTCACCACCGCAGCTGTAATGCTACTCCAAAATCACAACTTACAAACAGATTGGTCAATTCTCAACATCAAGGATTTACTTTCCTATTCTCTTTTTGGAGGAATAGTGAGTGGCATAAGCTTGAGCTTCAATGGATGGGCAATGAAGAAGAGAGGCCCAGTTTTGGTGTCAATTTTCAGTCCCATTGGAACTGTTTTCTCTCTCATTCTCTCTGTCTTCACCTTAGGAGACACTATTTCTATTGGAAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGGAAAAGAAGGTTATTGTGATGGAAGTGGCTATCAAAGTGATGACTTTGATCTTGAGAAACCTTTACTCTCTTGA 1053 41.79 MMTGGMEDAVVIGGLMAVQFIYAGNSVLLSYLMSLGLNPLTIVVCFASTTSLFLSPLAVYFERSKWPKKLSFKLTLQLVLISFGGVTLFQTLLLEGIKLTSPAMATAMPNLAPGLIFVIAWCCRLERVKLSCVYSKVKILGTLLCVVGALTMSIIQSSITIPAKDQLITTSQPTIVLFNKEKIVGCLYLMLAVFILSTNVVLQAKALGELPAPMSLSAVTSFIGVFTTAAVMLLQNHNLQTDWSILNIKDLLSYSLFGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSLILSVFTLGDTISIGSLAGMFLMFCGLYFVLWAKGKEGYCDGSGYQSDDFDLEKPLLS 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4321752 4328920 - CePI673135_01g004100.1 Cec01g0410 193627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0410 350 PANTHER WAT1-RELATED PROTEIN 16 330 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec01g0410 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 327 - -
Cec01g0410 350 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0410 Cec-Chr1:4321752 Cec02g1558 Cec-Chr2:33181021 1.20E-33 dispersed
Cec01g0410 Cec-Chr1:4321752 Cec10g0259 Cec-Chr10:2957416 3.60E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0410 - - - 0.0