Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0462 AAACTAAACGGTCTATCCTCAAGAATATCAGCCCTTGCACCTAAATATTGTACAGTCTATGCTATTTCAAAAGGAAAACTAGCCTCAATACGGCCGCCTAATACGGGGACAAATGTGAGCATTAAAGATGATGCAAGTGAAGCAAGTTCTGCGAATAGCTACTCAAGCCATACATCTGGCTCCCTTACAGATAGCAGTTCAAGCTTAGTTACCTCCTACTCTCATTTCCCTTCTCCCTCCTCTTCCTTACCATTACAACGATTTCAAGCTCTTTCAACCATTAATCAATCTCTTCTTACGACAAAACCGAGCCTCATTAAAGTCAACCATTCTAGATGTCAATCCGTTCATATTGAGAATCAGGTGGATGGAGCTCATTCTTCTTCCTATGCTTCCGATTGTGCACAAACATTGAGTCGAACCTCTAGTTGTAAAAGCTTGCCAGCAGATTACCAGTCCTGGGTTACTGATGAAGCTTCATCCACAGGCGCATTCAATGATTATCCTTCATGTGAAAGTCAGGCGGATGTGAGCTTTGAGCTTGAAAAGTTGAGAATCGAACTAAGACATGCGAGAGGAATGTATGCAATTGCTCAACGTGAGACAATTGATGCCTCTCGAAAGCTGAACCATCTAAGTAAGCAACGAACAGAGGAAGCTAGGAAGCTTGAAGAGATCAACAATAAAGAGGTAGCCACCAAAAAACTTGCAAGGGAAGAGAGAGAGAAACGTGAAGCTTTGAGAAGAGAAGCTAAGTATTTAAAAGAAAGCGCTGAAAGAGAGGGCATCTATAGGAAGGAAGCAGAGACAAAAGCTCTTCAGGATGCCAAAGAGAAGGGAAAGCATGAAAATGCTCTTCAAGGACCTCTGCAGCAATACCAATATTTTCAGTGGGAAGATATTGTTTCTGCCACATCATCTTTCTCTGAGGATCTTAAGATTGGAATGGGAGCACATGGAACAGTTTATAAGTGCAGCTTGCATCATACCACTGTAGCAGTGAAGGTTCTTCACTCTAGAGATGATCACAAAAAGATGCAATTTCTTCAGGAGCTTGAAATCTTGAGCAAAATCCATCACCCCCATCTACTATTACTCCTCGGTGCGTGTCCGGATAAGAATTGTCTGGTTTATGAGTACATGGAAAATGGTAGCTTGGAGGATAGGTTATACCACAGAGGCAATACACCTGCAATCCCATGGTATGAGAGGTTTCGAATTGCTTGGGAAATAGCTTCTGCTCTTGTCTTTCTTCACAGCTCAAAACCAAAACCCATAATCCACCGTGACCTTAAACCAGCAAACATCTTACTTGACCAAAACCTGGTGAGCAAAATCGGCGATGTCGGTCTTTCTACAGTGTTTAATTCAGACCCTTTAATGTCTACTGCATTCATGAATAGTGGACCAGTTGGGACTCTCTGCTACATAGATCCCGAGTATCAACGAACTGGGTTACTCTCGCCTAAGTCTGATGTCTATGCCTTTGGAATGGTAATCTTGCAGTTACTAACTGCAAAACCAGCAGTAGCACTAACCCATGTGGTGGAAACAGCCATTGATAACTGCACTTTAATTAATGTTCTGGATATAGAGGCTGGGGATTGGCCCATCGAAGGGACGTATGAATTGGCAAGATTAGGACTTCGCTGCACCGAGATGCAACGTAAAGATAGGCCTGACTTAAAGGATCAAGTGCTTCCCTTGTTGCTGACACTGAAAGAAGTTGCTGATGAGGCTCGCAATTTGGCCTCCAAAGTTCCACCTGCAATTCCTAATCATTTCATCTGTCCAATTCTTCAGGATGTGATGAATGACCCTTGTGTGGCGGCGGATGGATACACATACGATCGTCAGGCAATAGAGAAATGGATTCAGGAGAACGATAATTCACCCATAACGATCCGCCGCCGTCGCCACTGCCGTCGTTTAGCTGCCGTCGCCAGTGCCACCACTGCTGCCGCCGTCGCCGCTACTGCCCCCGCCGCCGCCGCCGCCGCCATATACCGCTGCCGTCGTCCTCAGCTGTCGCCTCCCTCGCCACTACTGATCACCGCCGCCGTCACAAATCGGTTGAGGGTAGGATAA 2088 45.35 KLNGLSSRISALAPKYCTVYAISKGKLASIRPPNTGTNVSIKDDASEASSANSYSSHTSGSLTDSSSSLVTSYSHFPSPSSSLPLQRFQALSTINQSLLTTKPSLIKVNHSRCQSVHIENQVDGAHSSSYASDCAQTLSRTSSCKSLPADYQSWVTDEASSTGAFNDYPSCESQADVSFELEKLRIELRHARGMYAIAQRETIDASRKLNHLSKQRTEEARKLEEINNKEVATKKLAREEREKREALRREAKYLKESAEREGIYRKEAETKALQDAKEKGKHENALQGPLQQYQYFQWEDIVSATSSFSEDLKIGMGAHGTVYKCSLHHTTVAVKVLHSRDDHKKMQFLQELEILSKIHHPHLLLLLGACPDKNCLVYEYMENGSLEDRLYHRGNTPAIPWYERFRIAWEIASALVFLHSSKPKPIIHRDLKPANILLDQNLVSKIGDVGLSTVFNSDPLMSTAFMNSGPVGTLCYIDPEYQRTGLLSPKSDVYAFGMVILQLLTAKPAVALTHVVETAIDNCTLINVLDIEAGDWPIEGTYELARLGLRCTEMQRKDRPDLKDQVLPLLLTLKEVADEARNLASKVPPAIPNHFICPILQDVMNDPCVAADGYTYDRQAIEKWIQENDNSPITIRRRRHCRRLAAVASATTAAAVAATAPAAAAAAIYRCRRPQLSPPSPLLITAAVTNRLRVG 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4770647 4782933 + CePI673135_01g004620.1 Cec01g0462 193679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0462 695 CDD RING-Ubox_WDSUB1-like 592 634 - -
Cec01g0462 695 ProSiteProfiles Protein kinase domain profile. 308 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0462 695 Gene3D Phosphorylase Kinase; domain 1 277 380 - -
Cec01g0462 695 Pfam Protein kinase domain 311 562 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0462 695 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 586 644 IPR013083 -
Cec01g0462 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g0462 695 ProSitePatterns Protein kinases ATP-binding region signature. 314 335 IPR017441 GO:0005524(InterPro)
Cec01g0462 695 Pfam U-box domain 591 636 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cec01g0462 695 PANTHER OS02G0152300 PROTEIN 8 644 IPR051348 -
Cec01g0462 695 SMART serkin_6 308 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0462 695 SMART Ubox_2 594 654 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cec01g0462 695 SUPERFAMILY Protein kinase-like (PK-like) 289 564 IPR011009 -
Cec01g0462 695 Gene3D Transferase(Phosphotransferase) domain 1 381 585 - -
Cec01g0462 695 SUPERFAMILY RING/U-box 585 634 - -
Cec01g0462 695 Coils Coil 181 201 - -
Cec01g0462 695 ProSiteProfiles U-box domain profile. 590 634 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cec01g0462 695 Coils Coil 209 257 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0462 Cec-Chr1:4770647 Cec11g0176 Cec-Chr11:1932542 1.90E-107 dispersed
Cec01g0462 Cec-Chr1:4770647 Cec05g0996 Cec-Chr5:8741943 6.10E-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71671 PF00069 Pkinase 5.60E-40 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0462 - - - 0.0