Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0465 ATGCTCAAACTAATTCTTCTCGTTGCTTCGGCCACCATTTTCCTCCTTCTCCTAATTTCCATCTTCATTTTTCGCCTTAGACTCTCTAAAAATCACCACATCCACAACCCTTCCCCCAATAAGAACAAGAAAACAGAGCACACGCCGCCGGAGCTCACCACTTTTGAGGGCGGCGAAGATTTGACGATCGACGAAATTCTAGAAGCTCCTGGGGAAGTGATCGGAAAATCCCATTATGGAACTCTGTATAAGGCTACGTTACAGAGCACCCAAACCACCCGGCTACTCAGATTCCTCCGCCCGGCCGCTGGCGGAGGAGACCATGATGACGACGTCGTTCGGTTTCTGGGTTCGATTCGGCACCGGAATTTGGTCCCGTTGCTGGGATTCTACGCCGGCGGGAGGGGAGAGAAGCTTCTGATTCATCCGTTCTACGAGCAGGGGAATTTGGCGGAGTTCATTAGAGGTGAAACAGAATCAAAAAATTGGGAGGTCATTTACAAAATCTCCATCGGAATCGCAAAAGCCCTGCATCATCTTCACAACGGATTGCAAAAACCAATCCCTCACGGAAATCTCAACTCCAACAACATTCTTCTCGATCGAAATCTCCATCCGCACGTCTCCGATTTCGGCCTCCATCTCCTCCTCAACGCCGCCGCAACTCGAGAAATGCTCCACGTTTCCGCCGCCGCTGGCTACAAAGCGCCGGAACTTATCAAAATGACCGACGCTGATGAATGCACCGACGTCTACAGCTACGGCAAGATCTTACTCGAGTTGCTCTCTGCCAAAGAGCCCACGATTCGAAATCCGGTTGCTACCGGCGATTCCGACGTTTCTGAAAATCGGATTCTCCGATGCATTCTTCAGATCGGCGAGGTTTGTTGTCGTTCTTCGCCGAATCTTCGGCCGGATTTCAAACAAGTGATTGCTAAGATCGAAGAAATCGGAAAGATTGAGATGGATTAA 972 50.0 MLKLILLVASATIFLLLLISIFIFRLRLSKNHHIHNPSPNKNKKTEHTPPELTTFEGGEDLTIDEILEAPGEVIGKSHYGTLYKATLQSTQTTRLLRFLRPAAGGGDHDDDVVRFLGSIRHRNLVPLLGFYAGGRGEKLLIHPFYEQGNLAEFIRGETESKNWEVIYKISIGIAKALHHLHNGLQKPIPHGNLNSNNILLDRNLHPHVSDFGLHLLLNAAATREMLHVSAAAGYKAPELIKMTDADECTDVYSYGKILLELLSAKEPTIRNPVATGDSDVSENRILRCILQIGEVCCRSSPNLRPDFKQVIAKIEEIGKIEMD 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4797820 4802049 - CePI673135_01g004650.1 Cec01g0465 193682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0465 323 Pfam Protein tyrosine and serine/threonine kinase 72 313 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g0465 323 ProSiteProfiles Protein kinase domain profile. 68 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0465 323 SUPERFAMILY Protein kinase-like (PK-like) 71 315 IPR011009 -
Cec01g0465 323 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 4 318 IPR052451 -
Cec01g0465 323 Gene3D Transferase(Phosphotransferase) domain 1 62 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0465 Cec-Chr1:4797820 Cec09g0907 Cec-Chr9:8588162 1.60E-43 dispersed
Cec01g0465 Cec-Chr1:4797820 Cec07g1806 Cec-Chr7:33714724 6.90E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71672 PF07714 PK_Tyr_Ser-Thr 5.10E-26 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0465 - - - 0.0